RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 SPTBP11277 2137 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 UBA6A0AVT1 1052 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 HEATR9A2RTY3 570 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 GSAPA4D1B5 854 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 MROH6A6NGR9 719 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 GOLGA8KD6RF30 607 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 GOLGA8TH3BQL2 631 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 H7C0S8 307 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NRDCO43847 1150 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF189O75820 626 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 KIAA0754O94854 1291 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 SUN1O94901 812 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NTRK1P04629 796 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 FAM87AP0C7U9 286 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 PVRP15151 417 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ADRA1DP25100 572 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NMBRP28336 390 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ARL4DP49703 201 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 RAB15P59190 212 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 PRAMEP78395 509 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NFKB2Q00653 900 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 RHDQ02161 417 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 GPR19Q15760 415 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 LINC00303Q3SY05 128 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 PRAMEF17Q5VTA0 474 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 CAPRIN2Q6IMN6 1127 aaKnown RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 TTC27Q6P3X3 843 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF534Q76KX8 674 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 TRIM73Q86UV7 250 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 OOSP2Q86WS3 158 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NLGN4XQ8N0W4 816 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 C2orf73Q8N5S3 287 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 PRELID2Q8N945 189 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 SIDT2Q8NBJ9 832 aaKnown RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 NLGN4YQ8NFZ3 816 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 OR52E1Q8NGJ3 308 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 CFAP61Q8NHU2 1237 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 FAM136AQ96C01 138 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ZDHHC12Q96GR4 267 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 LINC00615Q96LM1 132 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 TRIM56Q9BRZ2 755 aaKnown RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 FRMD8P1Q9BZ68 369 aaPredicted RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ASPSCR1Q9BZE9 553 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 ULBP3Q9BZM4 244 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 KCNF1Q9H3M0 494 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 EPB41L1Q9H4G0 881 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 SOHLH2Q9NX45 425 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 SYBUQ9NX95 663 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 PILRAQ9UKJ1 303 aa9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 TDRKHQ9Y2W6 561 aaKnown RBP9.23□□□□□ -0.93
NSMCE1-203ENST00000562039 IGLV3-16A0A075B6K0 115 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 OR5K3A6NET4 321 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 GOLGA6L3A6NEY3 463 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 SLC9B1P1A6NJY1 282 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 GOLGA8MH3BSY2 632 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 IFRD1O00458 451 aaPredicted RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 BTN3A3O00478 584 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 BTN3A1O00481 513 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF185O15231 689 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 AVILO75366 819 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 KATNA1O75449 491 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 SPAG6O75602 509 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 KRT14P02533 472 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ANKRD34CP0C6C1 535 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 CDH3P22223 829 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 F8A1P23610 371 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 CD82P27701 267 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 KPNA2P52292 529 aaKnown RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 GPS1Q13098 491 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 TUBB3Q13509 450 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 TBR1Q16650 682 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 SYTL3Q4VX76 610 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 FASTKD1Q53R41 847 aaKnown RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 COLEC12Q5KU26 742 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ANKRD22Q5VYY1 191 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 AFTPHQ6ULP2 937 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 PRSS42Q7Z5A4 293 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 FAM20CQ8IXL6 584 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 RBM12BQ8IXT5 1001 aaKnown RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 MPP5Q8N3R9 675 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF843Q8N446 348 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 EXD3Q8N9H8 876 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 OR5AR1Q8NGP9 310 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 OR4L1Q8NH43 312 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 HEXDCQ8WVB3 486 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 LCN9Q8WX39 176 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 KLHL6Q8WZ60 621 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 TFGQ92734 400 aaPredicted RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 MAGOHBQ96A72 148 aaKnown RBP9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 OR52A5Q9H2C5 316 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 SRMSQ9H3Y6 488 aa9.22□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF768Q9H5H4 540 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms