RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CXCR6O00574 342 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 AXIN1O15169 862 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 GPR182O15218 404 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 TSPAN12O95859 305 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 AKT1P31749 480 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 HOXD12P35452 270 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 VAC14Q08AM6 782 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PTGR1Q14914 329 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 INAQ16352 499 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 MAPKAPK3Q16644 382 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ZRANB3Q5FWF4 1079 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 LAIR2Q6ISS4 152 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF548Q8NEK5 533 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 GPR152Q8TDT2 470 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 CCDC97Q96F63 343 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 EXOC2Q96KP1 924 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 NSMCE3Q96MG7 304 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 CCDC115Q96NT0 180 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 AKIP1Q9NQ31 210 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 IGLV3-10A0A075B6K4 115 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 PFDN6O15212 129 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 UGT2B4P06133 528 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 MSH3P20585 1137 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 PCMT1P22061 227 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 EMX1Q04741 257 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 DNASE1L3Q13609 305 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ABRAXAS2Q15018 415 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 FAM174BQ3ZCQ3 159 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 PSAPL1Q6NUJ1 521 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 CCDC81Q6ZN84 652 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 PIANPQ8IYJ0 282 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 OR5K1Q8NHB7 308 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 MCOLN3Q8TDD5 553 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 HPS1Q92902 700 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 RIMKLBQ9ULI2 386 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 SCML2Q9UQR0 700 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 INVSQ9Y283 1065 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 BCKDKO14874 412 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 DNAJB5O75953 348 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ANGPTL1O95841 491 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 FTH1P02794 183 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 DCTP40126 519 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 SERPINB10P48595 397 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 DGUOKQ16854 277 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 PGS1Q32NB8 556 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF691Q5VV52 312 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 GOLGA7Q7Z5G4 137 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 TMEM179BQ7Z7N9 219 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 CADM3Q8N126 398 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ARL10Q8N8L6 244 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 MDGA1Q8NFP4 955 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 NDNFQ8TB73 568 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ITCHQ96J02 903 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 IKZF5Q9H5V7 419 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 BPIFA1Q9NP55 256 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 DNAH12Q6ZR08 3092 aa13.74□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC12A8A0AV02 714 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ANKRD28O15084 1053 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 AQP9O43315 295 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 JRKO75564 520 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 CHRNA1P02708 482 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FSHRP23945 695 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 MC4RP32245 332 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GRK4P32298 578 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 YBEYP58557 167 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 VBP1P61758 197 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 DGCR6Q14129 220 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 CCDC92Q53HC0 331 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 C10orf120Q5SQS8 335 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 CFAP52Q8N1V2 620 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FAR1Q8WVX9 515 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 SPON2Q9BUD6 331 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ATP13A3Q9H7F0 1226 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 SACM1LQ9NTJ5 587 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 EIF3LQ9Y262 564 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 VPS9D1Q9Y2B5 631 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TSC22D4Q9Y3Q8 395 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GPC6Q9Y625 555 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 IQCF5A8MTL0 148 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC22A1O15245 554 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TSPAN3O60637 253 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 SCELO95171 688 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms