RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CCDC78A2IDD5 438 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 GOLGA6L3A6NEY3 463 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 TLCD2A6NGC4 264 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 TERTO14746 1132 aaKnown RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 KRT86O43790 486 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 SLC28A2O43868 658 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 TIAF1O95411 115 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 EBLN1P0CF75 366 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 ETS1P14921 441 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 POLR2CP19387 275 aaPredicted RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 PDHA2P29803 388 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 DLSTP36957 453 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 ARCN1P48444 511 aaKnown RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 KPNA2P52292 529 aaKnown RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 POLE2P56282 527 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 HSD11B2P80365 405 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 NFKB2Q00653 900 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 CACNG1Q06432 222 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 TUBB3Q13509 450 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 DBN1Q16643 649 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 SKIDA1Q1XH10 827 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 CCDC38Q502W7 563 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 DNTTIP2Q5QJE6 756 aaKnown RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 ATP1A1-AS1Q5TC04 95 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PWWP2BQ6NUJ5 590 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PRICKLE2Q7Z3G6 844 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PRUNE1Q86TP1 453 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 OOSP2Q86WS3 158 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 KMT5CQ86Y97 462 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 SLC13A5Q86YT5 568 aaPredicted RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 D2HGDHQ8N465 521 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PHC3Q8NDX5 983 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 C1orf54Q8WWF1 131 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 STARD8Q92502 1023 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 STAMBPL1Q96FJ0 436 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PPM1MQ96MI6 270 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 FERD3LQ96RJ6 166 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 CD180Q99467 661 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 NRTNQ99748 197 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
CLK3-205ENST00000561673 SLC25A18Q9H1K4 315 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 OR52A5Q9H2C5 316 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PDE7BQ9NP56 450 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 LNPEPQ9UIQ6 1025 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 CROTQ9UKG9 612 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 RARRES3Q9UL19 164 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PADI1Q9ULC6 663 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 ZNF148Q9UQR1 794 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 PRSS21Q9Y6M0 314 aa10.02□□□□□ -0.81
CLK3-205ENST00000561673 OR51F1A6NGY5 319 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ERI2A8K979 691 aaKnown RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 GOLGA6L6A8MZA4 724 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 PYCARD-AS1I3L0S3 204 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 SUN1O94901 812 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 AP2A2O94973 939 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ZBTB11O95625 1053 aaPredicted RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 IFNB1P01574 187 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 NTRK1P04629 796 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 TCN2P20062 427 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 NDUFS1P28331 727 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 OAS2P29728 719 aaKnown RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 FDFT1P37268 417 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 GRIA1P42261 906 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 CCR10P46092 362 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 PREPP48147 710 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ARL4DP49703 201 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 MC1RQ01726 317 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ACY1Q03154 408 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 CDC20Q12834 499 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 CDH17Q12864 832 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 RPA4Q13156 261 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 KCNAB2Q13303 367 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 SNX1Q13596 522 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 RPS6KA1Q15418 735 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 DEFB109BQ30KR1 87 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 MEI1Q5TIA1 1274 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ARMC6Q6NXE6 501 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 C16orf46Q6P387 395 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 CYB5D1Q6P9G0 228 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 FBXO38Q6PIJ6 1188 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 BPHLQ86WA6 291 aaPredicted RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 DNAAF3Q8N9W5 541 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ACVR1CQ8NER5 493 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 OR13J1Q8NGT2 312 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 UBE2Q2Q8WVN8 375 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 LCN9Q8WX39 176 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 FCRL4Q96PJ5 515 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ADNPQ9H2P0 1102 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 SRMSQ9H3Y6 488 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 VPS37BQ9H9H4 285 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 AKIRIN1Q9H9L7 192 aaPredicted RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 FGF21Q9NSA1 209 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 SLC2A6Q9UGQ3 507 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms