RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LPGAT1Q92604 370 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 FGF11Q92914 225 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 TMEM159Q96B96 161 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 STAMBPL1Q96FJ0 436 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 C16orf45Q96MC5 204 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 ZNF578Q96N58 590 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 BIRC8Q96P09 236 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 TCF12Q99081 682 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 WDR83Q9BRX9 315 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 KIR3DX1Q9H7L2 352 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 SAMD15Q9P1V8 674 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 EPHA6Q9UF33 1036 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 SLC24A2Q9UI40 661 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 FAM169AQ9Y6X4 670 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 DSPP15924 2871 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 LAMA5O15230 3695 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 RAD51CO43502 376 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 NDUFS3O75489 264 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 TNFSF15O95150 251 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 S1PR4O95977 384 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 ITGA2BP08514 1039 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 CCL4P13236 92 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 ITGB6P18564 788 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 ITIH1P19827 911 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 AOAHP28039 575 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 CAPZBP47756 277 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 ITGA8P53708 1063 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 C2orf54Q08AI8 447 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 CBLBQ13191 982 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 BOP1Q14137 746 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 ZNF789Q5FWF6 425 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 CTSL3PQ5NE16 218 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 MRNIPQ6NTE8 343 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 FOXR1Q6PIV2 292 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 PDZD3Q86UT5 571 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 VRK3Q8IV63 474 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 UNC5BQ8IZJ1 945 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 KRT222Q8N1A0 295 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 PHC3Q8NDX5 983 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 SNF8Q96H20 258 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 NRTNQ99748 197 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 CMKLR1Q99788 373 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 EBNA1BP2Q99848 306 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 RAB33BQ9H082 229 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 SNX24Q9Y343 169 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
SNRPA1-213ENST00000560856 FAM187AA6NFU0 413 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 EFCAB8A8MWE9 144 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 SMAPO00193 183 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 AGRPO00253 132 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 CAPN5O15484 640 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 FGF3P11487 239 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 AMD1P17707 334 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 PAMP19021 973 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 RBMS1P29558 406 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 LEPRP48357 1165 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 ADARP55265 1226 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 PPP1CAP62136 330 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 BRD3Q15059 726 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 SDCCAG8Q86SQ7 713 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 LRRC6Q86X45 466 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 PLXDC1Q8IUK5 500 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 BMPERQ8N8U9 685 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 TFGQ92734 400 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 C9orf72Q96LT7 481 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 ERP44Q9BS26 406 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 TRIM31Q9BZY9 425 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 SEMA5BQ9P283 1151 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 PISDQ9UG56 409 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 CDC23Q9UJX2 597 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 PCDHGA7Q9Y5G6 932 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 HEBP2Q9Y5Z4 205 aa14.88□□□□□ -0.03
SNRPA1-213ENST00000560856 A0A087WV48 116 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 A8MU76 341 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 F8W8V4 182 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 KIF1CO43896 1103 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 SLCO2B1O94956 709 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 F7P08709 466 aaPredicted RBP14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 ANKRD34CP0C6C1 535 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 TPBGLP0DKB5 382 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 PGAM1P18669 254 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 NDUFS1P28331 727 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 EIF2S3P41091 472 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 PLOD1Q02809 727 aaPredicted RBP14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 CTBP1Q13363 440 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 CRYMQ14894 314 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 LONRF1Q17RB8 773 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 BBS9Q3SYG4 887 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 SNAP47Q5SQN1 464 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 DUPD1Q68J44 220 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 ZNF470Q6ECI4 717 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 DENND6AQ8IWF6 608 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 SLC22A15Q8IZD6 547 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 AGBL5Q8NDL9 886 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 TGM7Q96PF1 710 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 FERD3LQ96RJ6 166 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 MVB12BQ9H7P6 319 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 THSD1Q9NS62 852 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms