RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 FBXW11Q9UKB1 542 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 INTS6Q9UL03 887 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 A0A1W2PN81 502 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ASB14A6NK59 587 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 TSPAN4O14817 238 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 PLIN1O60240 522 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 GPRIN2O60269 458 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 MAGEC1O60732 1142 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ZNF217O75362 1048 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 HOXD4P09016 255 aaPredicted RBP2.06□□□□□ -2.08
SPG11-222ENST00000560435 CHRNA7P36544 502 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 PRKCZQ05513 592 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 MAP9Q49MG5 647 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 HSP90AB2PQ58FF8 381 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ZNF534Q76KX8 674 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 GSTA5Q7RTV2 222 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ABHD12Q8N2K0 398 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ARHGAP45Q92619 1136 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 ZBTB10Q96DT7 871 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 EGLN2Q96KS0 407 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 KAT14Q9H8E8 782 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 CWC15Q9P013 229 aaKnown RBP2.06□□□□□ -2.08
SPG11-222ENST00000560435 GRID1Q9ULK0 1009 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 TNNQ9UQP3 1299 aa2.06□□□□□ -2.08
SPG11-222ENST00000560435 LOC101059948A0A1B0GTJ6 334 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 KRTAP4-16G5E9R7 235 aaPredicted RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 PLPP2O43688 288 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 KRT6AP02538 564 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 KRT6BP04259 564 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 IFIT1P09914 478 aaKnown RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 PRKACGP22612 351 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 GGT5P36269 586 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 GRK6P43250 576 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 LEPRP48357 1165 aaKnown RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 KRT6CP48668 564 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 PRKAA1Q13131 559 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 FAM109BQ6ICB4 259 aaPredicted RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 ADCK1Q86TW2 530 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 SUMF1Q8NBK3 374 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 OR10G8Q8NGN5 311 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 TYMSOSQ8TAI1 123 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 GCC1Q96CN9 775 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 PDLIM5Q96HC4 596 aaKnown RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 SGK494Q96LW2 274 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 ZIM3Q96PE6 472 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 SLITRK2Q9H156 845 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 DENND2DQ9H6A0 471 aaPredicted RBP2.05□□□□□ -2.08
SPG11-222ENST00000560435 EPB41L5Q9HCM4 733 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 ITM2CQ9NQX7 267 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 TNFRSF19Q9NS68 423 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 SARDHQ9UL12 918 aa2.05□□□□□ -2.08
SPG11-222ENST00000560435 A0A087WUV0 522 aaPredicted RBP2.04□□□□□ -2.08
SPG11-222ENST00000560435 TMEM189-UBE2V1I3L0A0 370 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 J3QR06 171 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 DAB1O75553 588 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 PRKRAO75569 313 aaKnown RBP2.04□□□□□ -2.08
SPG11-222ENST00000560435 ACP2P11117 423 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 CA6P23280 308 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 NEXNQ0ZGT2 675 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 GAGE2BQ13066 116 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 UBE2V1Q13404 147 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 GAGE2EQ4V326 116 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 PRR30Q53SZ7 412 aaPredicted RBP2.04□□□□□ -2.08
SPG11-222ENST00000560435 GAGE2AQ6NT46 116 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 TSSK4Q6SA08 328 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 TPRG1Q6ZUI0 275 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 CEACAM19Q7Z692 300 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 ZBED8Q8IZ13 594 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 SPICE1Q8N0Z3 855 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 AQP11Q8NBQ7 271 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 KLHL30-AS1Q8NEE0 82 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 NUP37Q8NFH4 326 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 SMAP2Q8WU79 429 aaPredicted RBP2.04□□□□□ -2.08
SPG11-222ENST00000560435 HERVK_113Q902F9 699 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 TBC1D20Q96BZ9 403 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 AGAP4Q96P64 663 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 MTMR10Q9NXD2 777 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 TRMT1Q9NXH9 659 aaKnown RBP2.04□□□□□ -2.08
SPG11-222ENST00000560435 NDE1Q9NXR1 346 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 CTSZQ9UBR2 303 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 GAGE2DQ9UEU5 116 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 ZNF510Q9Y2H8 683 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 RIPK3Q9Y572 518 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 CAPN7Q9Y6W3 813 aa2.04□□□□□ -2.08
SPG11-222ENST00000560435 A0A1W2PRB8 838 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 A0A1W2PRG0 241 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 KLK2P20151 261 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 CA4P22748 312 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 HALP42357 657 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 CTCFP49711 727 aaPredicted RBP2.03□□□□□ -2.08
SPG11-222ENST00000560435 TAS2R40P59535 323 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 PRICKLE4Q2TBC4 344 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 EIPR1Q53HC9 387 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 SOWAHCQ53LP3 525 aaPredicted RBP2.03□□□□□ -2.08
SPG11-222ENST00000560435 BAIAP2L2Q6UXY1 529 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 KCNG4Q8TDN1 519 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 TSPAN16Q9UKR8 245 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 MKLN1Q9UL63 735 aa2.03□□□□□ -2.08
SPG11-222ENST00000560435 MED19A0JLT2 244 aaPredicted RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 EIF3CLB5ME19 914 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms