RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 DPEP2Q9H4A9 486 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 VPS37BQ9H9H4 285 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 PRDM9Q9NQV7 894 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 ZFATQ9P243 1243 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 GNPTGQ9UJJ9 305 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 MTO1Q9Y2Z2 717 aaKnown RBP8.85□□□□□ -0.99
HMG20A-209ENST00000559728 PCDHB1Q9Y5F3 818 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 CABIN1Q9Y6J0 2220 aa8.85□□□□□ -0.99
HMG20A-209ENST00000559728 ARID1BQ8NFD5 2236 aaPredicted RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 KLHL33A6NCF5 533 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 QSOX1O00391 747 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CTIFO43310 598 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 SNX2O60749 519 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 LDOC1O95751 146 aaPredicted RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 TSPAN12O95859 305 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 ABHD2P08910 425 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 GSTM1P09488 218 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CKMT2P17540 419 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CD9P21926 228 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 IDSP22304 550 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 FDXRP22570 491 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 ACP1P24666 158 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 STX2P32856 288 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 PPARGP37231 505 aaPredicted RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 FASLGP48023 281 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CD151P48509 253 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 TAS2R39P59534 338 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 GSTM4Q03013 218 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 SLC29A2Q14542 456 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 BRD3Q15059 726 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 SEPT7Q16181 437 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 RPE65Q16518 533 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 C14orf28Q4W4Y0 310 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 HECTD2Q5U5R9 776 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 PTRHD1Q6GMV3 140 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 DUS1LQ6P1R4 473 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 TRMT10CQ7L0Y3 403 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 SLCO6A1Q86UG4 719 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CEP97Q8IW35 865 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 SIDT2Q8NBJ9 832 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 ELMO1Q92556 727 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 RBBP8Q99708 897 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 OSGEPL1Q9H4B0 414 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 RHOJQ9H4E5 214 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 PPANQ9NQ55 473 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 FAM8A1Q9UBU6 413 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 IKZF3Q9UKT9 509 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 ACSL5Q9ULC5 683 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 PSMD13Q9UNM6 376 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 DHRS7Q9Y394 339 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 RNF215Q9Y6U7 377 aa8.84□□□□□ -0.99
HMG20A-209ENST00000559728 ASCC3Q8N3C0 2202 aaKnown RBP8.84□□□□□ -0.99
HMG20A-209ENST00000559728 KIR2DS5A0A0G2JLQ3 304 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 A0A0G2JNG1 304 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 SPAARA0A1B0GVQ0 90 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 DCDC2BA2VCK2 349 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 PDZK1P1A8MUH7 402 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 H3BMM5 538 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 KIR2DS3K7RE56 304 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 LIN7AO14910 233 aaPredicted RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 TNFSF14O43557 240 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 NUDT21O43809 227 aaKnown RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 KCNK5O95279 499 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 SHBGP04278 402 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 ALPPL2P10696 532 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 XRCC1P18887 633 aaPredicted RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 GMPRP36959 345 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 GP5P40197 560 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 LIMK2P53671 638 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 CSE1LP55060 971 aaKnown RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 CFHR1Q03591 330 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 RPA4Q13156 261 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 BOP1Q14137 746 aaKnown RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 GRB7Q14451 532 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 KIR2DS5Q14953 304 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 NR0B2Q15466 257 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 ZKSCAN8Q15776 578 aaPredicted RBP8.83□□□□□ -1
HMG20A-209ENST00000559728 ACSBG2Q5FVE4 666 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 PLEKHS1Q5SXH7 462 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 CEP128Q6ZU80 1094 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 PDZD3Q86UT5 571 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 SLC22A15Q8IZD6 547 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 PPM1NQ8N819 430 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 DCAKDQ8WVC6 231 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 ANKRD49Q8WVL7 239 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 SLC44A1Q8WWI5 657 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 GLMNQ92990 594 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 ATXN7L3BQ96GX2 97 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 VPS39Q96JC1 886 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 CYTH2Q99418 400 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 GPR21Q99679 349 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 GPR22Q99680 433 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 CPNE1Q99829 537 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 RTKNQ9BST9 563 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 MENTQ9BUN1 341 aa8.83□□□□□ -1
HMG20A-209ENST00000559728 SLC40A1Q9NP59 571 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms