RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 AP2A2O94973 939 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 C1QAP02745 245 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 SLC2A4P14672 509 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 AOAHP28039 575 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 RBMS1P29558 406 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 PEBP1P30086 187 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 SLC5A2P31639 672 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 MAPK9P45984 424 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 RPL21P46778 160 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 CLN3Q13286 438 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 EIF3IQ13347 325 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 BOP1Q14137 746 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 MAP9Q49MG5 647 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 CCSMST1Q4G0I0 132 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 HP1BP3Q5SSJ5 553 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 PHF19Q5T6S3 580 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 NLRP9Q7RTR0 991 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 DTX1Q86Y01 620 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 PPIL6Q8IXY8 311 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 SPATA4Q8NEY3 305 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 HNRNPLLQ8WVV9 542 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 USP7Q93009 1102 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 NAF1Q96HR8 494 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 KRT12Q99456 494 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 NAP1L3Q99457 506 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 IMP3Q9NV31 184 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 GRHL1Q9NZI5 618 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 PISDQ9UG56 409 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 KLHL3Q9UH77 587 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 ACSL5Q9ULC5 683 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 CHD6Q8TD26 2715 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 ZFYVE26Q68DK2 2539 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SDR42E2A6NKP2 422 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CAPN5O15484 640 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 RAD51CO43502 376 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 NIPSNAP2O75323 286 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CTSBP07858 339 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ITGA2BP08514 1039 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF28P17035 718 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 MLLT3P42568 568 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CAPZBP47756 277 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 MPP1Q00013 466 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 TLE3Q04726 772 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CBLBQ13191 982 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CTBP1Q13363 440 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 COL28A1Q2UY09 1125 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 FASTKD1Q53R41 847 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SNAP47Q5SQN1 464 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 IZUMO3Q5VZ72 239 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 TIPARPQ7Z3E1 657 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF572Q7Z3I7 529 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CILP2Q8IUL8 1156 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 RASGRP3Q8IV61 690 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SPACA3Q8IXA5 215 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SH3KBP1Q96B97 665 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF669Q96BR6 464 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 DCUN1D1Q96GG9 259 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CARD6Q9BX69 1037 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 RAB33BQ9H082 229 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 XKR8Q9H6D3 395 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 KIR3DX1Q9H7L2 352 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 EPHA6Q9UF33 1036 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 CIDEBQ9UHD4 219 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 ICKQ9UPZ9 632 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 RUVBL2Q9Y230 463 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 NFS1Q9Y697 457 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 TEX264Q9Y6I9 313 aa12.31□□□□□ -0.44
RABGGTA-207ENST00000558936 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 TIAF1O95411 115 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 VCLP18206 1134 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 RPS3P23396 243 aaKnown RBP eCLIP12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 ITGA8P53708 1063 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 PCBP4P57723 403 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 PRAMEP78395 509 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 DR1Q01658 176 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 PRKG2Q13237 762 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 COL9A2Q14055 689 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 ANKS6Q68DC2 871 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 FAM92BQ6ZTR7 304 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 PDZD3Q86UT5 571 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 SLC22A15Q8IZD6 547 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 AVL9Q8NBF6 648 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
RABGGTA-207ENST00000558936 ACVR1CQ8NER5 493 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms