RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 CERS4Q9HA82 394 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 RIC8BQ9NVN3 520 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 WBP1LQ9NX94 342 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ARL15Q9NXU5 204 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ZDHHC3Q9NYG2 299 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 BCAP29Q9UHQ4 241 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 BBIP1A8MTZ0 92 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 GRXCR1A8MXD5 290 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 LOC730098B7Z3J9 87 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 LIN7AO14910 233 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 LSM1O15116 133 aaKnown RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 VPS4BO75351 444 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 MATN4O95460 622 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 MT-ND1P03886 318 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CTSLP07711 333 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 NSG1P42857 185 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 SPINT3P49223 89 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 RHDQ02161 417 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CAMK1Q14012 370 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 RCAN2Q14206 197 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CPSF6Q16630 551 aaKnown RBP eCLIP10.36□□□□□ -0.75
TPM1-210ENST00000558264 ZXDCQ2QGD7 858 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 GPR33Q49SQ1 333 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 OGFOD2Q6N063 350 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 SPATA19Q7Z5L4 167 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 C12orf40Q86WS4 652 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ITFG1Q8TB96 612 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 EME1Q96AY2 570 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ROPN1LQ96C74 230 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CIB1Q99828 191 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CD244Q9BZW8 370 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 MRGBPQ9NV56 204 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 SUN2Q9UH99 717 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 CNOT6Q9ULM6 557 aaKnown RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 ERVW-1Q9UQF0 538 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 TNPO3Q9Y5L0 923 aaKnown RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 A0A1W2PP18 115 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ANTXRLA6NF34 631 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 TMEM202A6NGA9 273 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 OTCP00480 354 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 POLR2EP19388 210 aaKnown RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 OXTRP30559 389 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 VIPR2P41587 438 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 PSMD8P48556 350 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 FPGSQ05932 587 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 PDK3Q15120 406 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ZNF77Q15935 545 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 FBXO46Q6PJ61 603 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 DNAJC14Q6Y2X3 702 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 RALGPS2Q86X27 583 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 KIAA2013Q8IYS2 634 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 RNF175Q8N4F7 328 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 PPM1MQ96MI6 270 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 MCCC1Q96RQ3 725 aaPredicted RBP10.36□□□□□ -0.75
TPM1-210ENST00000558264 LYSMD1Q96S90 227 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 VCXQ9H320 206 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ACTL8Q9H568 366 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 YY1AP1Q9H869 796 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 ZDHHC7Q9NXF8 308 aa10.36□□□□□ -0.75
TPM1-210ENST00000558264 PLK4O00444 970 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 AKAP10O43572 662 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 C8BP07358 591 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 CKMT2P17540 419 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 NELFEP18615 380 aaKnown RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 RPIAP49247 311 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 NEK2P51955 445 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 HMBOX1Q6NT76 420 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ELMSAN1Q6PJG2 1045 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 CYP20A1Q6UW02 462 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 HACD2Q6Y1H2 254 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 UBE2R2Q712K3 238 aaPredicted RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 SFTPA1Q8IWL2 248 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 CBARPQ8N350 705 aaPredicted RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 LILRA3Q8N6C8 439 aaPredicted RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 ULK4Q96C45 1275 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 RAD9AQ99638 391 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 PCDH12Q9NPG4 1184 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ZNF490Q9ULM2 529 aaPredicted RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 PDE10AQ9Y233 779 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 AP4B1Q9Y6B7 739 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 INPP4BO15327 924 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ITPKAP23677 461 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 PEX19P40855 299 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 MTPNP58546 118 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 SELPLGQ14242 412 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 TTLL9Q3SXZ7 439 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 LYPLAL1Q5VWZ2 237 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 FOXB2Q5VYV0 432 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 NAIF1Q69YI7 327 aaPredicted RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 TMC5Q6UXY8 1006 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 EFL1Q7Z2Z2 1120 aaKnown RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 TMEM125Q96AQ2 219 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ISG20Q96AZ6 181 aaKnown RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 WRAP53Q9BUR4 548 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms