RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ITGB2P05107 769 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 GSTA2P09210 222 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 ACP5P13686 325 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 NME1P15531 152 aaKnown RBP11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 ITGB6P18564 788 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 OGNP20774 298 aaKnown RBP11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 EPHA1P21709 976 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 TGM1P22735 817 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 TNFRSF8P28908 595 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 FMO4P31512 558 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 NSG1P42857 185 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 ABCG1P45844 678 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 CCT8P50990 548 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 PMS2P54278 862 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 SHBQ15464 509 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 INSCQ1MX18 579 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 TEDDM1Q5T9Z0 273 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 PTRHD1Q6GMV3 140 aaKnown RBP11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 TAF8Q7Z7C8 310 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 CTAGE3PQ8IX95 158 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 CLPBQ9H078 707 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 RMI1Q9H9A7 625 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 UCKL1Q9NWZ5 548 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 MOCS1Q9NZB8 636 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 SPASTQ9UBP0 616 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 VTI1BQ9UEU0 232 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 KCNK6Q9Y257 313 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 DNAJC16Q9Y2G8 782 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 DGKBQ9Y6T7 804 aa11.82□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZFHX2Q9C0A1 2572 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 EP300Q09472 2414 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZFC3H1O60293 1989 aaKnown RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 C4orf47A7E2U8 309 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 IQCF5A8MTL0 148 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 PRMT5O14744 637 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 CHUKO15111 745 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 FFAR2O15552 330 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 AQP9O43315 295 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 DFNA5O60443 496 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 POP7O75817 140 aaKnown RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 HAUS5O94927 633 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 TRIM16O95361 564 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 DGKAP23743 735 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 MCM3P25205 808 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 PHBP35232 272 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 RXRGP48443 463 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 RAC1P63000 192 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 SETDB1Q15047 1291 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 TYSND1Q2T9J0 566 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 WDR93Q6P2C0 686 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 CNSTQ6PJW8 725 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 SLC30A9Q6PML9 568 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 RELL1Q8IUW5 271 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZNF547Q8IVP9 402 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 LMNTD2Q8IXW0 634 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 KIAA2013Q8IYS2 634 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 PPM1NQ8N819 430 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 EIF1ADQ8N9N8 165 aaKnown RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 C2CD4AQ8NCU7 369 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZNF548Q8NEK5 533 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 EPS8L3Q8TE67 593 aaKnown RBP11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 CDKL2Q92772 493 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 ATXN7L3BQ96GX2 97 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 LRRC61Q9BV99 259 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 OSGEPL1Q9H4B0 414 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 KLC4Q9NSK0 619 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 SLC23A2Q9UGH3 650 aa11.81□□□□□ -0.52
HMGB1P8-201ENST00000558211 BPTFQ12830 3046 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 GPR89AB7ZAQ6 455 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 SGTAO43765 313 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 SNX2O60749 519 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 SPAG6O75602 509 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 AHSGP02765 367 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ANXA6P08133 673 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 OR56A5P0C7T3 313 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 GPR89BP0CG08 455 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 EPHA8P29322 1005 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 STX2P32856 288 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ACTR1BP42025 376 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ACTR1AP61163 376 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ILF3Q12906 894 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 FRG1Q14331 258 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 BRD3Q15059 726 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ELOCQ15369 112 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 DEFB133Q30KQ1 61 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 KBTBD12Q3ZCT8 623 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 PACS1Q6VY07 963 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 NAPRTQ6XQN6 538 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 STRA8Q7Z7C7 330 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms