RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CYHR1Q6ZMK1 362 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 RD3Q7Z3Z2 195 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 HID1Q8IV36 788 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 VRK3Q8IV63 474 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SPNS2Q8IVW8 549 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 TSACCQ96A04 125 aaPredicted RBP16.52■□□□□ 0.24
SNX1-203ENST00000558040 CCDC126Q96EE4 140 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 OSGEPL1Q9H4B0 414 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 TM7SF3Q9NS93 570 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 KLC4Q9NSK0 619 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 TRNAU1APQ9NX07 287 aaKnown RBP16.52■□□□□ 0.24
SNX1-203ENST00000558040 GULP1Q9UBP9 304 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SLC23A2Q9UGH3 650 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SUSD2Q9UGT4 822 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 DNAJC16Q9Y2G8 782 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 PCDHGA2Q9Y5H1 932 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SLCO1B1Q9Y6L6 691 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 NCOR1O75376 2440 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 CEP192Q8TEP8 1941 aa16.52■□□□□ 0.23
SNX1-203ENST00000558040 TARM1B6A8C7 271 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 VILLO15195 856 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 HRO43593 1189 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 GPR37L1O60883 481 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 S100BP04271 92 aaPredicted RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 WNT1P04628 370 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 BPGMP07738 259 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 ENO2P09104 434 aaPredicted RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 SLC35G4P0C7Q5 338 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 TPBGLP0DKB5 382 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 ATP5F1P24539 256 aaPredicted RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 DPP6P42658 865 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 HK3P52790 923 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 GYS2P54840 703 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 C21orf59P57076 290 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 GUCY1A3Q02108 690 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 SRSF5Q13243 272 aaKnown RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 FZD2Q14332 565 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 FAM83HQ6ZRV2 1179 aaPredicted RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 NUDCD3Q8IVD9 361 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 TMEM151AQ8N4L1 468 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 LILRA3Q8N6C8 439 aaPredicted RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 ZC3H10Q96K80 434 aaKnown RBP16.51■□□□□ 0.23
SNX1-203ENST00000558040 ATOH8Q96SQ7 321 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 TRIM54Q9BYV2 358 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 OARD1Q9Y530 152 aa16.51■□□□□ 0.23
SNX1-203ENST00000558040 A0A1B0GTW7 788 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 PRR33A8MZF0 331 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 SUPT3HB4E1H0 165 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 G3V2L1 256 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 IFRD1O00458 451 aaPredicted RBP16.5■□□□□ 0.23
SNX1-203ENST00000558040 SUPT3HO75486 399 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 MATN4O95460 622 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 CATP04040 527 aaKnown RBP16.5■□□□□ 0.23
SNX1-203ENST00000558040 CYP2A7P20853 494 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 IDSP22304 550 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 ITPKAP23677 461 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 MAP4P27816 1152 aaKnown RBP16.5■□□□□ 0.23
SNX1-203ENST00000558040 PDHA2P29803 388 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 CLCNKAP51800 687 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 PRKAA2P54646 552 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.237e-7■■■■□ 23.2
SNX1-203ENST00000558040 EIF2B5Q13144 721 aaKnown RBP16.5■□□□□ 0.23
SNX1-203ENST00000558040 PCLAFQ15004 111 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 UBE2R2Q712K3 238 aaPredicted RBP16.5■□□□□ 0.23
SNX1-203ENST00000558040 PDZD3Q86UT5 571 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 PHACTR4Q8IZ21 702 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 PPP1R14CQ8TAE6 165 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 RAB3IL1Q8TBN0 382 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 ASB11Q8WXH4 323 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 EXT2Q93063 718 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 CAPS2Q9BXY5 557 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 OR52A5Q9H2C5 316 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 RDH14Q9HBH5 336 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 NUDT4Q9NZJ9 180 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 IKZF3Q9UKT9 509 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 KCNK6Q9Y257 313 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 TRIOO75962 3097 aa16.5■□□□□ 0.23
SNX1-203ENST00000558040 WDR91A4D1P6 747 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 GFYI3L273 518 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 SNX2O60749 519 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 H2AFYO75367 372 aaKnown RBP16.49■□□□□ 0.23
SNX1-203ENST00000558040 PSIP1O75475 530 aaKnown RBP16.49■□□□□ 0.23
SNX1-203ENST00000558040 RPN2P04844 631 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 HIST1H2AGP0C0S8 130 aaPredicted RBP16.49■□□□□ 0.23
SNX1-203ENST00000558040 SBK3P0C264 359 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 CTSEP14091 401 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 GFAPP14136 432 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 HIST1H2ADP20671 130 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 KCNA4P22459 653 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 ALDH3A1P30838 453 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 NXPH1P58417 271 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 ABRQ12979 859 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 TGFBIQ15582 683 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms