RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CACNG1Q06432 222 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 TMED1Q13445 227 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 AASDHQ4L235 1098 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 FGD3Q5JSP0 725 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 SPANXN4Q5MJ08 99 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 FEM1AQ9BSK4 669 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 CLPBQ9H078 707 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 IFT80Q9P2H3 777 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 PCDHGA11Q9Y5H2 935 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 TRIM64CA6NLI5 447 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 BNIP3LO60238 219 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 IL7RP16871 459 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 PSMA3P25788 255 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 PIGFQ07326 219 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 SLC22A15Q8IZD6 547 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 CLEC4FQ8N1N0 589 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 GOLM1Q8NBJ4 401 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 TNKS2Q9H2K2 1166 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 CCL27Q9Y4X3 112 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 H3BMQ9 156 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 H7C4K7 107 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 PFDN6O15212 129 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 C1QCP02747 245 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 MTHFRP42898 656 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 ADARP55265 1226 aaKnown RBP17.4■□□□□ 0.38
XRCC3-218ENST00000557439 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 KIAA0040Q15053 153 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 PCBP2Q15366 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
XRCC3-218ENST00000557439 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
XRCC3-218ENST00000557439 DPP10Q8N608 796 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 DRAXINQ8NBI3 349 aaPredicted RBP17.4■□□□□ 0.38
XRCC3-218ENST00000557439 OSCP1Q8WVF1 389 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 COG8Q96MW5 612 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 EXD2Q9NVH0 621 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 SLC25A37Q9NYZ2 338 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 TRPM5Q9NZQ8 1165 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.4■□□□□ 0.38
XRCC3-218ENST00000557439 CLEC4EQ9ULY5 219 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 PCDHB3Q9Y5E6 796 aa17.4■□□□□ 0.38
XRCC3-218ENST00000557439 FZD6O60353 706 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 ALBP02768 609 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 S100BP04271 92 aaPredicted RBP17.39■□□□□ 0.38
XRCC3-218ENST00000557439 GSNP06396 782 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 TFPTP0C1Z6 253 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 CDH1P12830 882 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 HMGCLP35914 325 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 ARSFP54793 590 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 SMAD3P84022 425 aaKnown RBP17.39■□□□□ 0.38
XRCC3-218ENST00000557439 TAF12Q16514 161 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 KLHL35Q6PF15 583 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 SUSD1Q6UWL2 747 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 USP51Q70EK9 711 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 TSPAN33Q86UF1 283 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 MSRB3Q8IXL7 192 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 LIX1Q8N485 282 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 MYO19Q96H55 970 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 BDH2Q9BUT1 245 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 IL26Q9NPH9 171 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 WWOXQ9NZC7 414 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 LIMD1Q9UGP4 676 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 AFF4Q9UHB7 1163 aaKnown RBP17.39■□□□□ 0.38
XRCC3-218ENST00000557439 ANGPTL3Q9Y5C1 460 aa17.39■□□□□ 0.38
XRCC3-218ENST00000557439 SCN5AQ14524 2016 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 H7C0S8 307 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 ANXA6P08133 673 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 UMPSP11172 480 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 MBL2P11226 248 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 PRKACGP22612 351 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 MRPL19P49406 292 aaKnown RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 PWP1Q13610 501 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 ACBD5Q5T8D3 534 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 ARMC12Q5T9G4 340 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 XKR5Q6UX68 686 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 TMCO2Q7Z6W1 182 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 ADAMTSL2Q86TH1 951 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 ANKRD46Q86W74 232 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 PROSER1Q86XN7 944 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 RNF217Q8TC41 542 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 PLD4Q96BZ4 506 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 CLSTN3Q9BQT9 956 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 KLF16Q9BXK1 252 aaPredicted RBP17.39■□□□□ 0.37
XRCC3-218ENST00000557439 MUC13Q9H3R2 512 aa17.39■□□□□ 0.37
XRCC3-218ENST00000557439 TYW5A2RUC4 315 aaKnown RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 TRIM64A6NGJ6 449 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 RAD51BO15315 384 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 SELPP16109 830 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 GGT1P19440 569 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 LRRC73Q5JTD7 316 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ELMSAN1Q6PJG2 1045 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 RFLNAQ6ZTI6 216 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 CHST9Q7L1S5 443 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ZSWIM9Q86XI8 627 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 OR2T12Q8NG77 320 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 SLC13A3Q8WWT9 602 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 AUTS2Q8WXX7 1259 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 GTF2H4Q92759 462 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms