RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 UGT8Q16880 541 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 ATP13A4Q4VNC1 1196 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 H2AFVQ71UI9 128 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 C11orf96Q7Z7L8 435 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 SYVN1Q86TM6 617 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 ZNF547Q8IVP9 402 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.48□□□□□ -1.05
VRK1-206ENST00000557222 SIDT2Q8NBJ9 832 aaKnown RBP8.48□□□□□ -1.05
VRK1-206ENST00000557222 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 LRFN5Q96NI6 719 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 GPR63Q9BZJ6 419 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 CBX8Q9HC52 389 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 LATS2Q9NRM7 1088 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 LNPEPQ9UIQ6 1025 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 CAPN11Q9UMQ6 739 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 VPS4AQ9UN37 437 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 ZNF711Q9Y462 761 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 BLACEA4D250 179 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 TLCD2A6NGC4 264 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 K7EM74 188 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 KCNK1O00180 336 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 KIF1CO43896 1103 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 SERPINC1P01008 464 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 PYGMP11217 842 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 RPL10P27635 214 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 PBX1P40424 430 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 MLLT10P55197 1068 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 RPS15P62841 145 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 ZBTB17Q13105 803 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 TUBB3Q13509 450 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 GALNT3Q14435 633 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 TEX44Q53QW1 395 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 LDLRAP1Q5SW96 308 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 FHL5Q5TD97 284 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 IZUMO3Q5VZ72 239 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 SLC9A4Q6AI14 798 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 CAPRIN2Q6IMN6 1127 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 IRGCQ6NXR0 463 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 ZNF517Q6ZMY9 492 aaPredicted RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 BZW1Q7L1Q6 419 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 AMZ2Q86W34 360 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 D2HGDHQ8N465 521 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 PLD5Q8N7P1 536 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 CT55Q8WUE5 264 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 RSC1A1Q92681 617 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 ZNF514Q96K75 400 aaPredicted RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 TTC25Q96NG3 672 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 OLFM3Q96PB7 478 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 ACTL8Q9H568 366 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 ARFGAP3Q9NP61 516 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 HACD3Q9P035 362 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 CTTNBP2NLQ9P2B4 639 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 NENFQ9UMX5 172 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 SHOC2Q9UQ13 582 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 FARSAQ9Y285 508 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 DNAJC16Q9Y2G8 782 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 LUC7L2Q9Y383 392 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
VRK1-206ENST00000557222 ZNF106Q9H2Y7 1883 aaKnown RBP8.47□□□□□ -1.05
VRK1-206ENST00000557222 MED13Q9UHV7 2174 aa8.46□□□□□ -1.05
VRK1-206ENST00000557222 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.05
VRK1-206ENST00000557222 IGHV5-51A0A0C4DH38 117 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 LOC285095A0A1B0GVY8 99 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 SSU72P8A0A1W2PR75 194 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 OR52A4PA6NMU1 304 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 APOL1O14791 398 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 CPNE3O75131 537 aaKnown RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 CEACAM4O75871 244 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 DDAH2O95865 285 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 RAB40ALP0C0E4 278 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 MSL3P1P0C860 447 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 FOLR1P15328 257 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 HNRNPH3P31942 346 aaKnown RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 ARHGAP25P42331 645 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 NR2C2P49116 596 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ARL4DP49703 201 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 PGDP52209 483 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 GSDMDP57764 484 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TAS2R40P59535 323 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TPM4P67936 248 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TUBB4BP68371 445 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 HSD11B2P80365 405 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 AP1B1Q10567 949 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 LAMB3Q13751 1172 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TUBB2AQ13885 445 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 IQCB1Q15051 598 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 NFKBIBQ15653 356 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ATP13A5Q4VNC0 1218 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TMTC4Q5T4D3 741 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ZNF648Q5T619 568 aaPredicted RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 LRRC38Q5VT99 294 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ALS2CLQ60I27 953 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 PWWP2BQ6NUJ5 590 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 FAM92BQ6ZTR7 304 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TRAPPC5Q8IUR0 188 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms