RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 TMEM184BQ9Y519 407 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-224ENST00000556737 HEATR9A2RTY3 570 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 OR5K3A6NET4 321 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 TK2O00142 265 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 RAD1O60671 282 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 GOT2P00505 430 aaKnown RBP10.07□□□□□ -0.8
SHMT2-224ENST00000556737 POLBP06746 335 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 APRTP07741 180 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 LIFP15018 202 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 ZNF28P17035 718 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 PDHA2P29803 388 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 KCNJ1P48048 391 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 PREPP48147 710 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 SEMA3AQ14563 771 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 PLCL1Q15111 1095 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 MANEAQ5SRI9 462 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 TEX35Q5T0J7 233 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 IRGCQ6NXR0 463 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 AFTPHQ6ULP2 937 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 CEACAM20Q6UY09 585 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 FAM92BQ6ZTR7 304 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 TAS2R42Q7RTR8 314 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 TIPARPQ7Z3E1 657 aaKnown RBP10.07□□□□□ -0.8
SHMT2-224ENST00000556737 CREG2Q8IUH2 290 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 CFAP206Q8IYR0 622 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 RASGEF1CQ8N431 466 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 MAIP1Q8WWC4 291 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 SLC41A2Q96JW4 573 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 ZPBPQ9BS86 351 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 CCM2Q9BSQ5 444 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 SEMA4CQ9C0C4 833 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 L2HGDHQ9H9P8 463 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 DRG1Q9Y295 367 aaKnown RBP10.07□□□□□ -0.8
SHMT2-224ENST00000556737 TCAF1Q9Y4C2 921 aa10.07□□□□□ -0.8
SHMT2-224ENST00000556737 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
SHMT2-224ENST00000556737 IGHV5-51A0A0C4DH38 117 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 TCRBV7S3A2A0A539 114 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 E7EVH7 732 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 RASSF9O75901 435 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 STK17BO94768 372 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 AP2A2O94973 939 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 NELFEP18615 380 aaKnown RBP10.06□□□□□ -0.8
SHMT2-224ENST00000556737 ADRA1DP25100 572 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 NSG1P42857 185 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 LMAN1P49257 510 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 SEPHS1P49903 392 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 CRADDP78560 199 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 COL9A2Q14055 689 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-224ENST00000556737 BOP1Q14137 746 aaKnown RBP10.06□□□□□ -0.8
SHMT2-224ENST00000556737 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 CACHD1Q5VU97 1274 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 CERS6Q6ZMG9 384 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 KLHL7Q8IXQ5 586 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 CACNA2D3Q8IZS8 1091 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 LKAAEAR1Q8TD35 194 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 ZFPM2Q8WW38 1151 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 PEX13Q92968 403 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 HDAC10Q969S8 669 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 RNF31Q96EP0 1072 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 WBP1Q96G27 269 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 ZDHHC12Q96GR4 267 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 SGSM3Q96HU1 749 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 NRTNQ99748 197 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 VPS37BQ9H9H4 285 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 TREX1Q9NSU2 369 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 MARCH4Q9P2E8 410 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-224ENST00000556737 PCDHB11Q9Y5F2 797 aa10.06□□□□□ -0.8
SHMT2-224ENST00000556737 LOC101059948A0A1B0GTJ6 334 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 OR6C74A6NCV1 312 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 TLCD2A6NGC4 264 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 POLR1CO15160 346 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 OR1I1O60431 355 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 TIAF1O95411 115 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 GAS8O95995 478 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 GSTM1P09488 218 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 FGF5P12034 268 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 FOLR1P15328 257 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 TPSB2P20231 275 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 ARNTP27540 789 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 NDUFS1P28331 727 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 STAT5AP42229 794 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 MAGEA6P43360 314 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 ARCN1P48444 511 aaKnown RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 CD151P48509 253 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 KPNA2P52292 529 aaKnown RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 BASP1P80723 227 aaKnown RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 GSTM4Q03013 218 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 RPA4Q13156 261 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 MAP7Q14244 749 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 KCNJ11Q14654 390 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 KCNAB1Q14722 419 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 TPSAB1Q15661 275 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms