RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 RGRP47804 291 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MARCKSL1P49006 195 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ADPRHP54922 357 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 WNT3AP56704 352 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RWDD2BP57060 319 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CLDN2P57739 230 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RPS21P63220 83 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ARHGAP8P85298 464 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 GBE1Q04446 702 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SLC10A2Q12908 348 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RFTN1Q14699 578 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 GRM3Q14832 879 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ACOX1Q15067 660 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PAFAH1B3Q15102 231 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PDK1Q15118 436 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 HLA-BQ31612 363 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SETMARQ53H47 684 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ZNF542PQ5EBM4 170 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 TFDP3Q5H9I0 405 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SPDYCQ5MJ68 293 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MBNL2Q5VZF2 373 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SEL1L3Q68CR1 1132 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 NCBP2-AS2Q69YL0 99 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CCDC70Q6NSX1 233 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 AADACL2Q6P093 401 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ERAP2Q6P179 960 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 BZW1Q7L1Q6 419 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PARS2Q7L3T8 475 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PID1Q7Z2X4 250 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RABEPKQ7Z6M1 372 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ARHGAP12Q8IWW6 846 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CCDC13Q8IYE1 715 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SYCE1Q8N0S2 351 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 NDUFAF2Q8N183 169 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PQLC3Q8N755 202 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PLD5Q8N7P1 536 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 PPM1NQ8N819 430 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CCDC112Q8NEF3 446 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SNX33Q8WV41 574 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 KRT35Q92764 455 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RMDN1Q96DB5 314 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RBM41Q96IZ5 413 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 WWC2-AS2Q96NR7 200 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 AGAP3Q96P47 875 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 LGMNQ99538 433 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SEMA3CQ99985 751 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 FAM118BQ9BPY3 351 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 FERMT1Q9BQL6 677 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SLC17A9Q9BYT1 436 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 TSGA10Q9BZW7 698 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 GAREM1Q9H706 876 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SUDS3Q9H7L9 328 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 C10orf88Q9H8K7 445 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 TM9SF3Q9HD45 589 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 FZD3Q9NPG1 666 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 TRMT1Q9NXH9 659 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 RCOR3Q9P2K3 495 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 LHX3Q9UBR4 397 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CHKBQ9Y259 395 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ITM2BQ9Y287 266 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 REXO2Q9Y3B8 237 aaKnown RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SPTBN4Q9H254 2564 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 LRP4O75096 1905 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 A0A1W2PPC4 97 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 LNP1A1A4G5 178 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 GRID2IPA4D2P6 1211 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 GOLGA6L9A6NEM1 432 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PRAMEF26H0Y7S4 382 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 TLR4O00206 839 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 FPGTO14772 594 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 SCAMP1O15126 338 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PJA2O43164 708 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 SLC7A4O43246 635 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PSTPIP1O43586 416 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 TSPAN6O43657 245 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PLRG1O43660 514 aaKnown RBP4.65□□□□□ -1.67
ATXN3-238ENST00000556288 LRP3O75074 770 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PHF2O75151 1096 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 PMPCBO75439 489 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 TM7SF2O76062 418 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 TJP3O95049 919 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 SLC4A1P02730 911 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 IGHV4-34P06331 123 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 RBP3P10745 1247 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 GYPEP15421 78 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 AGXTP21549 392 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 CCND1P24385 295 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 NFKBIAP25963 317 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 AKT2P31751 481 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 GARSP41250 739 aaKnown RBP4.65□□□□□ -1.67
ATXN3-238ENST00000556288 CD86P42081 329 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 CDKN2BP42772 138 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 CCR5P51681 352 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 ARSEP51690 589 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 THOP1P52888 689 aa4.65□□□□□ -1.67
ATXN3-238ENST00000556288 TERF1P54274 439 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms