RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 EGFL8Q99944 293 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 DCUN1D5Q9BTE7 237 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TTPALQ9BTX7 342 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 FAM126AQ9BYI3 521 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 CRISPLD1Q9H336 500 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CWH43Q9H720 699 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 IPPKQ9H8X2 491 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 LIN28AQ9H9Z2 209 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 RNF186Q9NXI6 227 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TMEM9Q9P0T7 183 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 SLAMF8Q9P0V8 285 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 GNPTGQ9UJJ9 305 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 AP3M1Q9Y2T2 418 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 DHRS7Q9Y394 339 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ZNF711Q9Y462 761 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 A0A0J9YVX5 310 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 C16orf96A6NNT2 1141 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 H3BMQ9 156 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 SLC28A1O00337 649 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 GNGT2O14610 69 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 LSM1O15116 133 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 FFAR2O15552 330 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 HOXA2O43364 376 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 TBC1D4O60343 1298 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 TSPAN3O60637 253 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 KATNA1O75449 491 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 CNPP09543 421 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 THRBP10828 461 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 SLC2A4P14672 509 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 HOXB6P17509 224 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 ATF6P18850 670 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 GGT1P19440 569 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 DGKAP23743 735 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 IL12AP29459 219 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 MTHFRP42898 656 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 HLCSP50747 726 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ARSFP54793 590 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 MTPNP58546 118 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ADARB1P78563 741 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 TRAF2Q12933 501 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 PMS2P3Q13401 168 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 DAG1Q14118 895 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 MBTPS1Q14703 1052 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 RAB39AQ14964 217 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 PLCL1Q15111 1095 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 NEDD8Q15843 81 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 IMPG1Q17R60 797 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 SMU1Q2TAY7 513 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 BROXQ5VW32 411 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 GPR107Q5VW38 600 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ZNF773Q6PK81 442 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 DLEU7Q6UYE1 221 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 Q6ZSR9 355 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 USP51Q70EK9 711 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 RIMKLAQ8IXN7 391 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 RBFAQ8N0V3 343 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 CARNMT1Q8N4J0 409 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 DTWD1Q8N5C7 304 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 GLB1L3Q8NCI6 653 aaPredicted RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 ZNF555Q8NEP9 628 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 OR2T12Q8NG77 320 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 OR4F6Q8NGB9 312 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 CD99L2Q8TCZ2 262 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 SLC13A3Q8WWT9 602 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 TMBIM1Q969X1 311 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ISG20Q96AZ6 181 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 MAGED4Q96JG8 741 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 COG8Q96MW5 612 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 RDH12Q96NR8 316 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 CCDC115Q96NT0 180 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 THUMPD3Q9BV44 507 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 MRPL9Q9BYD2 267 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 P2RY12Q9H244 342 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ELAC1Q9H777 363 aaKnown RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 TBC1D23Q9NUY8 699 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 TRPM5Q9NZQ8 1165 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 IFT80Q9P2H3 777 aaPredicted RBP6.88□□□□□ -1.31
TDP1-213ENST00000555880 OPTCQ9UBM4 332 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ZMYM5Q9UJ78 669 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 BLOC1S6Q9UL45 172 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 CDC14AQ9UNH5 594 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ASB1Q9Y576 335 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
TDP1-213ENST00000555880 ZNF840PA6NDX5 716 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 G3V2T6 193 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 H0Y626 953 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 OR7A17O14581 309 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 COCHO43405 550 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 STC2O76061 302 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 GJB5O95377 273 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 VNN2O95498 520 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PRAMEF1O95521 474 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 GLUD1P00367 558 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 IL6P05231 212 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 IRF1P10914 325 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms