RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CCDC189A1A4V9 331 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 PDZK1P1A8MUH7 402 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 PHGDHO43175 533 aaKnown RBP12.2□□□□□ -0.46
SHMT2-221ENST00000555773 OPA1O60313 960 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SNX2O60749 519 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-221ENST00000555773 ACADLP28330 430 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 PDHA2P29803 388 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 HALP42357 657 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 PREPP48147 710 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 ATP6V0D1P61421 351 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SLC14A1Q13336 389 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 FAM83EQ2M2I3 478 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 TNFAIP8L3Q5GJ75 292 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 OGFOD3Q6PK18 319 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 NAPRTQ6XQN6 538 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 CYHR1Q6ZMK1 362 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 CMC1Q7Z7K0 106 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 TBC1D1Q86TI0 1168 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-221ENST00000555773 CPNE9Q8IYJ1 553 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 MINDY1Q8N5J2 469 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 LILRA3Q8N6C8 439 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-221ENST00000555773 FAM46DQ8NEK8 389 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 EEF1AKMT1Q8WVE0 214 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 UBXN10Q96LJ8 280 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 FOPNLQ96NB1 174 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 DUSP23Q9BVJ7 150 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 IL21RQ9HBE5 538 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 NMRAL1Q9HBL8 299 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 DNAAF2Q9NVR5 837 aaKnown RBP12.2□□□□□ -0.46
SHMT2-221ENST00000555773 UCKL1Q9NWZ5 548 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 HEBP2Q9Y5Z4 205 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 OTOGLQ3ZCN5 2332 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 CABIN1Q9Y6J0 2220 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 BPTFQ12830 3046 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 A0A1W2PPM1 405 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 A6NCN8 305 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 AGPSO00116 658 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 SLC16A5O15375 505 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 SDC3O75056 442 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 MATN4O95460 622 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TSPAN12O95859 305 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 CELA2BP08218 269 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-221ENST00000555773 LTA4HP09960 611 aaKnown RBP12.19□□□□□ -0.46
SHMT2-221ENST00000555773 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ALPPL2P10696 532 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 F3P13726 295 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TGM1P22735 817 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 RPL10P27635 214 aaKnown RBP12.19□□□□□ -0.46
SHMT2-221ENST00000555773 CCT5P48643 541 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 NHLH1Q02575 133 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 PPM1JQ5JR12 505 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TCEAL6Q6IPX3 200 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 UNC5DQ6UXZ4 953 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 SH2D5Q6ZV89 423 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 KANSL1Q7Z3B3 1105 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 PDZD3Q86UT5 571 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TRABD2AQ86V40 505 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 VRK3Q8IV63 474 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 AVL9Q8NBF6 648 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ANKRD49Q8WVL7 239 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ZFPM2Q8WW38 1151 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ASB11Q8WXH4 323 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TFGQ92734 400 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TCEAL3Q969E4 200 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ALKBH8Q96BT7 664 aaKnown RBP12.19□□□□□ -0.46
SHMT2-221ENST00000555773 LINGO1Q96FE5 620 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 DERL2Q9GZP9 239 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 WWP1Q9H0M0 922 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 VPS11Q9H270 941 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ZNF446Q9NWS9 450 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 NLGN3Q9NZ94 848 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 DCDC2Q9UHG0 476 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 WDR37Q9Y2I8 494 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 ACTL7BQ9Y614 415 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 PI4KAP42356 2102 aa12.19□□□□□ -0.46
SHMT2-221ENST00000555773 EP300Q09472 2414 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 PLXNB3Q9ULL4 1909 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 GFYI3L273 518 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 SASH3O75995 380 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 KLHL2O95198 593 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 RPN2P04844 631 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms