RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 C6orf62Q9GZU0 229 aaPredicted RBP16.79■□□□□ 0.28
PPP4R3A-208ENST00000555462 FAM124BQ9H5Z6 455 aaPredicted RBP16.79■□□□□ 0.28
PPP4R3A-208ENST00000555462 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
PPP4R3A-208ENST00000555462 PTBP2Q9UKA9 531 aaKnown RBP16.79■□□□□ 0.28
PPP4R3A-208ENST00000555462 ERVK-8P63133 956 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 EMX1Q04741 257 aaPredicted RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 EPS8Q12929 822 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 INAVAQ3KP66 663 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LRRC73Q5JTD7 316 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 ZNF362Q5T0B9 420 aaPredicted RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LAIR1Q6GTX8 287 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 RGMBQ6NW40 437 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 MSANTD2Q6P1R3 559 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 SLC22A16Q86VW1 577 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 CLIP4Q8N3C7 705 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 PACRGLQ8N7B6 248 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 DUS3LQ96G46 650 aaKnown RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 EGLN2Q96KS0 407 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 TUBA8Q9NY65 449 aaPredicted RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 CPQQ9Y646 472 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LOC100506127A0A0U1RQW1 187 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LCKP06239 509 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 FGF4P08620 206 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 UAP1L1Q3KQV9 507 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LAIR2Q6ISS4 152 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 THEM5Q8N1Q8 247 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LIX1Q8N485 282 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 DPH2Q9BQC3 489 aaPredicted RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 ACBD6Q9BR61 282 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 INPP5KQ9BT40 448 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 CSNK1G1Q9HCP0 422 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 RIC8BQ9NVN3 520 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 COMMD8Q9NX08 183 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 SLCO3A1Q9UIG8 710 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 CDH7Q9ULB5 785 aa16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
PPP4R3A-208ENST00000555462 LOC100130705A0A1B0GUX0 176 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 NDUFS2O75306 463 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 EEDO75530 441 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 DNTTP04053 509 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 DNAJB2P25686 324 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 GTF2E2P29084 291 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 NUDT6P53370 316 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 IL2P60568 153 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 CRY1Q16526 586 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 ATXN7L2Q5T6C5 722 aaPredicted RBP16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 AHSA2Q719I0 299 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 TMEM221A6NGB7 291 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 SULT1C4O75897 302 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 UROSP10746 265 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 DBTP11182 482 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 MAGEA8P43361 318 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 EMX2Q04743 252 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 DDX39BQ13838 428 aaKnown RBP16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 BRMS1LQ5PSV4 323 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 ARTNQ5T4W7 220 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 RNF19BQ6ZMZ0 732 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 SLC16A12Q6ZSM3 486 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 ALPK1Q96QP1 1244 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 RERGLQ9H628 205 aa16.77■□□□□ 0.28
PPP4R3A-208ENST00000555462 CLDN25C9JDP6 229 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 RECQL5O94762 991 aaPredicted RBP16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 GLUD1P00367 558 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 RAP2AP10114 183 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 CDH1P12830 882 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 HOXD12P35452 270 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 NR4A2P43354 598 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 POLD2P49005 469 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 SFSWAPQ12872 951 aaKnown RBP16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 BRSK1Q8TDC3 778 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 SERPINB11Q96P15 392 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 OR52E6Q96RD3 313 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 PTPN18Q99952 460 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 PCDHB9Q9Y5E1 797 aa16.77■□□□□ 0.27
PPP4R3A-208ENST00000555462 SLC1A7O00341 560 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 E2F3O00716 465 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 STX7O15400 261 aaKnown RBP16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 TBX1O43435 398 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 SEC14L2O76054 403 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 FKBP9O95302 570 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 ANGPTL1O95841 491 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 IGLV3-25P01717 112 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 BMP4P12644 408 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 MRPS6P82932 125 aaKnown RBP16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 ARHGEF7Q14155 803 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 COLEC12Q5KU26 742 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 CES5AQ6NT32 575 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 FAM171BQ6P995 826 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 USP51Q70EK9 711 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 FKBP9P1Q75LS8 142 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 CEP68Q76N32 757 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 ZNF540Q8NDQ6 660 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 ZNF420Q8TAQ5 688 aaPredicted RBP16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
PPP4R3A-208ENST00000555462 EBPLQ9BY08 206 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms