RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TAS2R42Q7RTR8 314 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 TIPARPQ7Z3E1 657 aaKnown RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 PPP1R3BQ86XI6 285 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 PIANPQ8IYJ0 282 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 D2HGDHQ8N465 521 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 SIDT2Q8NBJ9 832 aaKnown RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 OR52K1Q8NGK4 314 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 CTRCQ99895 268 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 TLR10Q9BXR5 811 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 ULBP3Q9BZM4 244 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 TFB2MQ9H5Q4 396 aaKnown RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 FAM96AQ9H5X1 160 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 GPN2Q9H9Y4 310 aaPredicted RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 APMAPQ9HDC9 416 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 PDE7BQ9NP56 450 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 LATS2Q9NRM7 1088 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 RAB6BQ9NRW1 208 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 HRASLS2Q9NWW9 162 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 TUBD1Q9UJT1 453 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 ATMQ13315 3056 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 IGHV5-51A0A0C4DH38 117 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CCDC162PA2VCL2 907 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CCL22O00626 93 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 KIF1CO43896 1103 aaKnown RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 ZBTB11O95625 1053 aaPredicted RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 PRB1P04280 392 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 POLBP06746 335 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 APRTP07741 180 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 SEPHS1P49903 392 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CDKN1CP49918 316 aaPredicted RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 HSD11B2P80365 405 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CCZ1BP86790 482 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CCZ1P86791 482 aaPredicted RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 KRT33BQ14525 404 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 TBR1Q16650 682 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 AARS2Q5JTZ9 985 aaKnown RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 TSTD2Q5T7W7 516 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 C6orf15Q6UXA7 325 aaPredicted RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 CLDN19Q8N6F1 224 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 OR13J1Q8NGT2 312 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 ARHGAP9Q9BRR9 750 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 LZTFL1Q9NQ48 299 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 C1GALT1Q9NS00 363 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 BTRCQ9Y297 605 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 TCAF1Q9Y4C2 921 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
VRK1-204ENST00000555351 CFAP46Q8IYW2 2715 aa11.53□□□□□ -0.56
VRK1-204ENST00000555351 UBA6A0AVT1 1052 aaPredicted RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 B8ZZF3 427 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 KDM1AO60341 852 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 SPAG6O75602 509 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 FGGP02679 453 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 RPL22P35268 128 aaKnown RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 NPY2RP49146 381 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 ARL4DP49703 201 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TUBB4BP68371 445 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 SH3BP2P78314 561 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TUBB3Q13509 450 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 SNX1Q13596 522 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 LY6DQ14210 128 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 PCID2Q5JVF3 399 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 BORAQ6PGQ7 559 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 ZNF605Q86T29 641 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 RASGRP3Q8IV61 690 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 MPP5Q8N3R9 675 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 LILRA3Q8N6C8 439 aaPredicted RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 EXD3Q8N9H8 876 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 OR4L1Q8NH43 312 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 LCN9Q8WX39 176 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 JPH3Q8WXH2 748 aaPredicted RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 SEC14L1Q92503 715 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TFGQ92734 400 aaPredicted RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 EXTL1Q92935 676 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 STAMBPL1Q96FJ0 436 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 MAP3K3Q99759 626 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 TSSK1BQ9BXA7 367 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 PITPNM3Q9BZ71 974 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 IL22Q9GZX6 179 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 SRMSQ9H3Y6 488 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 FGF21Q9NSA1 209 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 GEMIN8Q9NWZ8 242 aaKnown RBP11.52□□□□□ -0.57
VRK1-204ENST00000555351 POLG2Q9UHN1 485 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 KCND3Q9UK17 655 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 POMT2Q9UKY4 750 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms