RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 BTBD3Q9Y2F9 522 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 DNAJC16Q9Y2G8 782 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CEP250Q9BV73 2442 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 MYO15AQ9UKN7 3530 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 TMEM120BA0PK00 339 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 OR5K4A6NMS3 321 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 PRPF4O43172 522 aaKnown RBP eCLIP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 TNFSF14O43557 240 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 OR1I1O60431 355 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 SNX2O60749 519 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 KRT37O76014 449 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 KRT38O76015 456 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 WISP3O95389 354 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 ESR1P03372 595 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 SLC35G4P0C7Q5 338 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 CEACAM1P13688 526 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 KRT15P19012 456 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 RPS3P23396 243 aaKnown RBP eCLIP10.7□□□□□ -0.73e-9■■■□□ 14.9
SHMT2-218ENST00000555213 CNTFP26441 200 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 SPRP35270 261 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 ADARP55265 1226 aaKnown RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 PLOD1Q02809 727 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 DMPKQ09013 629 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 PUM1Q14671 1186 aaKnown RBP eCLIP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 LGSNQ5TDP6 509 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 NRROSQ86YC3 692 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 CLDN19Q8N6F1 224 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 BEND7Q8N7W2 519 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 KYQ8NBH2 561 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 OR6C4Q8NGE1 309 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 OR2L2Q8NH16 312 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 ZDHHC1Q8WTX9 485 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 LPGAT1Q92604 370 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 NAT6Q93015 286 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 MTBPQ96DY7 904 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 APOLD1Q96LR9 279 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 GPR22Q99680 433 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 RHOJQ9H4E5 214 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 TXNDC16Q9P2K2 825 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 GULP1Q9UBP9 304 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 FAM8A1Q9UBU6 413 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 ACSL5Q9ULC5 683 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 PCYT1BQ9Y5K3 369 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-218ENST00000555213 IKBKGQ9Y6K9 419 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 VPS13AQ96RL7 3174 aa10.7□□□□□ -0.7
SHMT2-218ENST00000555213 CABIN1Q9Y6J0 2220 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 KIR2DS5A0A0G2JLQ3 304 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 A0A0G2JNG1 304 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 C17orf113A0A1B0GUU1 675 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 E5RI56 91 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 KIR2DS3K7RE56 304 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 LIN7AO14910 233 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 KPNA5O15131 536 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 ZW10O43264 779 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CBFA2T3O75081 653 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 APOA4P06727 396 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 GIMD1P0DJR0 217 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CKMT1AP12532 417 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 F3P13726 295 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CHN1P15882 459 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CKMT2P17540 419 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 ATP5DP30049 168 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 ETV4P43268 484 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 GUCY1A3Q02108 690 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 BOP1Q14137 746 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 KIR2DS5Q14953 304 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 SEPT7Q16181 437 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 C14orf28Q4W4Y0 310 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 RBM20Q5T481 1227 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 AGAP9Q5VTM2 703 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 C11orf96Q7Z7L8 435 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CEP97Q8IW35 865 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 TRIM48Q8IWZ4 208 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 PLD6Q8N2A8 252 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 BAHD1Q8TBE0 780 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 MAPK15Q8TD08 544 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 ELMO1Q92556 727 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 TMEM159Q96B96 161 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CCDC97Q96F63 343 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 VPS39Q96JC1 886 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CAMK1GQ96NX5 476 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CAAP1Q9H8G2 361 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 CAB39LQ9H9S4 337 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 SPATS2LQ9NUQ6 558 aaKnown RBP10.69□□□□□ -0.7
SHMT2-218ENST00000555213 DLL3Q9NYJ7 618 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 SENP1Q9P0U3 644 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 TBC1D29Q9UFV1 150 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 SLC23A2Q9UGH3 650 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 GRID1Q9ULK0 1009 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 MED16Q9Y2X0 877 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 PLEKHM1Q9Y4G2 1056 aa10.69□□□□□ -0.7
SHMT2-218ENST00000555213 COMMD10Q9Y6G5 202 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms