RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SULF1Q8IWU6 871 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 SLC7A6Q92536 515 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 SLC9A7Q96T83 725 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TM9SF2Q99805 663 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 APOL4Q9BPW4 351 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 SMURF2Q9HAU4 748 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 ZBTB20Q9HC78 741 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TNFRSF12AQ9NP84 129 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TRMT13Q9NUP7 481 aaKnown RBP15.43■□□□□ 0.06
SYNE3-203ENST00000554873 TEKT2Q9UIF3 430 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 AP3M1Q9Y2T2 418 aa15.43■□□□□ 0.06
SYNE3-203ENST00000554873 LOC110117498-PIK3R3F6TDL0 507 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ZFC3H1O60293 1989 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 HUS1O60921 280 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TULP3O75386 442 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 PSKH1P11801 424 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 IL12RB1P42701 662 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SRP54P61011 504 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SNTA1Q13424 505 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 DENND5AQ6IQ26 1287 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 CLEC20AQ6ZU45 233 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 PLCZ1Q86YW0 608 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 MICU2Q8IYU8 434 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TRIM8Q9BZR9 551 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF556Q9HAH1 456 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 NSMCE4AQ9NXX6 385 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 CFL2Q9Y281 166 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TPRKBQ9Y3C4 175 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 MEIOCA2RUB1 952 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 YJEFN3A6XGL0 299 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SCO1O75880 301 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ANGPTL1O95841 491 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ALDOCP09972 364 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 CHRM3P20309 590 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ATP5F1P24539 256 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TGFBR2P37173 567 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 RPS5P46782 204 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 MASP1P48740 699 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TAF6P49848 677 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 COQ5Q5HYK3 327 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 NOTUMQ6P988 496 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SPNS2Q8IVW8 549 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SETD6Q8TBK2 473 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 FBLIM1Q8WUP2 373 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 KCTD13Q8WZ19 329 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 TMCO6Q96DC7 493 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 FYTTD1Q96QD9 318 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 CCDC32Q9BV29 185 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 ULBP1Q9BZM6 244 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 DUSP21Q9H596 190 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 USE1Q9NZ43 259 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 EIF3KQ9UBQ5 218 aaKnown RBP15.42■□□□□ 0.06
SYNE3-203ENST00000554873 SBF1O95248 1867 aa15.42■□□□□ 0.06
SYNE3-203ENST00000554873 H3BUI4 141 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 PRMT5O14744 637 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 MT-CO1P00395 513 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 IFI30P13284 250 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 ADCYAP1R1P41586 468 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 RAB10P61026 200 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 SCAPQ12770 1279 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 IL18R1Q13478 541 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 GLYATQ6IB77 296 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 NAPEPLDQ6IQ20 393 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 XKRXQ6PP77 449 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 LIX1LQ8IVB5 337 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 PPP1R13LQ8WUF5 828 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 OSMRQ99650 979 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 MRPL57Q9BQC6 102 aaKnown RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 CHST12Q9NRB3 414 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 PEX16Q9Y5Y5 336 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 TSC2P49815 1807 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 FAM92AA1XBS5 289 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 H3BQ06 376 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 SOX11P35716 441 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 ETV6P41212 452 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 MTHFRP42898 656 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 FCGRTP55899 365 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 EEFSECP57772 596 aaKnown RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 SLC35A2P78381 396 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 RABL3Q5HYI8 236 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 CTU1Q7Z7A3 348 aaKnown RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 SPATA22Q8NHS9 363 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 CNIH3Q8TBE1 160 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
SYNE3-203ENST00000554873 UQCC2Q9BRT2 126 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 MROH8Q9H579 483 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 ENTPD7Q9NQZ7 604 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 GLTPQ9NZD2 209 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 TNFRSF10DQ9UBN6 386 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 TBC1D24Q9ULP9 559 aa15.41■□□□□ 0.06
SYNE3-203ENST00000554873 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 ATP6AP2A0A1C7CYW4 349 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 NEMP2A6NFY4 417 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 KCNJ13O60928 360 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 GPR32O75388 356 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 ATP6AP2O75787 350 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 PDGFAP04085 211 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms