RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 HNRNPCL3B7ZW38 293 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 PRAC2D3DTV9 90 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 TRIM77I1YAP6 450 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 MEIS2O14770 477 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 KRT36O76013 467 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 BMP10O95393 424 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 GCNT3O95395 438 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RPN1P04843 607 aaKnown RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 HNRNPCL4P0DMR1 293 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 HLA-DOBP13765 273 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 IFNAR1P17181 557 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ERCC2P18074 760 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ACHEP22303 614 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 MT3P25713 68 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 TNNT3P45378 269 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 NPY4RP50391 375 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RAB28P51157 221 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 TPD52P55327 224 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RELQ04864 619 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RUNX1T1Q06455 604 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 MZT1Q08AG7 82 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 TFCP2Q12800 502 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 PLA2G7Q13093 441 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 VWC2Q2TAL6 325 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF718Q3SXZ3 478 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF672Q499Z4 452 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 FAM76BQ5HYJ3 339 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 C9orf50Q5SZB4 431 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ARMC4Q5T2S8 1044 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 KRT39Q6A163 491 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ZBTB49Q6ZSB9 765 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 Q6ZTC4 211 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 Q75L30 129 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 FAM114A1Q8IWE2 563 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 NAGSQ8N159 534 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 CCAR2Q8N163 923 aaKnown RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 GBGT1Q8N5D6 347 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RFLNBQ8N5W9 214 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 GCSAMQ8N6F7 178 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 SPATA3Q8NHX4 192 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 BBS10Q8TAM1 723 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 LNX1Q8TBB1 728 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 DNAAF4Q8WXU2 420 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 FIG4Q92562 907 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 SEMA4DQ92854 862 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 JAKMIP1Q96N16 626 aaKnown RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 MS4A10Q96PG2 267 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 DPAGT1Q9H3H5 408 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 RETREG1Q9H6L5 497 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 NOL11Q9H8H0 719 aaKnown RBP2.99□□□□□ -1.93
SCFD1-213ENST00000554776 UBTD1Q9HAC8 227 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 EQTNQ9NQ60 294 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 KLHL1Q9NR64 748 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 NPAP1Q9NZP6 1156 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ICAM5Q9UMF0 924 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 AMDHD2Q9Y303 409 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.99□□□□□ -1.933e-6■□□□□ 10.2
SCFD1-213ENST00000554776 ARHGEF37A1IGU5 675 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 OR5K3A6NET4 321 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 KRT86O43790 486 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF432O94892 652 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 CAMTA2O94983 1202 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TGDSO95455 350 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 FYNP06241 537 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ATP5BP06576 529 aaKnown RBP2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SCG2P13521 617 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 GNL1P36915 607 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-213ENST00000554776 PSMC4P43686 418 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 DLX5P56178 289 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 CDK3Q00526 305 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 RBPJQ06330 500 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ACSM1Q08AH1 577 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SCARB2Q14108 478 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 KRT81Q14533 505 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ZRSR1Q15695 479 aaKnown RBP2.98□□□□□ -1.93
SCFD1-213ENST00000554776 HYAL4Q2M3T9 481 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM35AQ53FP2 167 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 UNQ6126/PRO20091Q6UXV3 157 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 MFSD6Q6ZSS7 791 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TUBA1AQ71U36 451 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM219Q86XT9 240 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 RNF113BQ8IZP6 322 aaKnown RBP2.98□□□□□ -1.93
SCFD1-213ENST00000554776 OR8H3Q8N146 312 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ANKRD13CQ8N6S4 541 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 OR5M8Q8NGP6 311 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SPATA20Q8TB22 786 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 DNASE2BQ8WZ79 361 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SPDL1Q96EA4 605 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 OXNAD1Q96HP4 312 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-213ENST00000554776 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 NEK1Q96PY6 1258 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 FNBP1Q96RU3 617 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SLC22A12Q96S37 553 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TUBA1CQ9BQE3 449 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 SYT17Q9BSW7 474 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 EDEM3Q9BZQ6 932 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ANKZF1Q9H8Y5 726 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ZWILCHQ9H900 591 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 TRPC7Q9HCX4 862 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 MIOSQ9NXC5 875 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms