RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GRID2O43424 1007 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 B4GAT1O43505 415 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 NUAK1O60285 661 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SNX2O60749 519 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 ANXA9O76027 345 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 MT-ND3P03897 115 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 ITGA2BP08514 1039 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SNRPAP09012 282 aaKnown RBP12.23□□□□□ -0.45
SHMT2-214ENST00000554604 ACP5P13686 325 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 KRT4P19013 534 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 HLA-DPA1P20036 260 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CNTFP26441 200 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 UGT1A5P35504 534 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 HMGCLP35914 325 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CHRNA4P43681 627 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 GEMP55040 296 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 B4GALNT1Q00973 533 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SLC1A5Q15758 541 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 USP53Q70EK8 1073 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SPACA3Q8IXA5 215 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 BLOC1S5Q8TDH9 187 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CCDC97Q96F63 343 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CRELD1Q96HD1 420 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 MRGPRX2Q96LB1 330 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 PLEKHG4BQ96PX9 1271 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 STN1Q9H668 368 aaKnown RBP12.23□□□□□ -0.45
SHMT2-214ENST00000554604 TRIM39Q9HCM9 518 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 WDR70Q9NW82 654 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 KCNK4Q9NYG8 393 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 AKAP7Q9P0M2 348 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-214ENST00000554604 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 ATXN10Q9UBB4 475 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 KCNK6Q9Y257 313 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 LOC400499M0QZD8 3231 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CDRT15L2A8MXV6 281 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 TCP11X1B4DZS4 312 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 GPR89AB7ZAQ6 455 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PPM1DO15297 605 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 KLK10O43240 276 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 KRT38O76015 456 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 KIAA0754O94854 1291 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 GPR89BP0CG08 455 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 SLC2A4P14672 509 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF8P17098 575 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 TAC1P20366 129 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 MGAT1P26572 445 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 NPY2RP49146 381 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CORO7P57737 925 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 TLE3Q04726 772 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 ZFP36L1Q07352 338 aaKnown RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 NR1D2Q14995 579 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PDK4Q16654 411 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 INSCQ1MX18 579 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 ZDHHC20Q5W0Z9 365 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 SH2D5Q6ZV89 423 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 GLT6D1Q7Z4J2 308 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 SLC37A2Q8TED4 501 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CDKL2Q92772 493 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 TMEM159Q96B96 161 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PRR11Q96HE9 360 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 APOPT1Q96IL0 206 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 SLC38A3Q99624 504 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 DPH1Q9BZG8 443 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 LRRC40Q9H9A6 602 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 MLXIPLQ9NP71 852 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 SMYD2Q9NRG4 433 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PISDQ9UG56 409 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 AAR2Q9Y312 384 aaKnown RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PKP3Q9Y446 797 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 LOXL2Q9Y4K0 774 aa12.22□□□□□ -0.45
SHMT2-214ENST00000554604 PCYT1BQ9Y5K3 369 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 MAGEB16A2A368 324 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CXorf49A8MYA2 514 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 VEGFDO43915 354 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SNX3O60493 162 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CDK14O94921 469 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 HGFP14210 728 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 FOXN2P32314 431 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms