RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DUS2Q9NX74 493 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CDH22Q9UJ99 828 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MAP3K4Q9Y6R4 1608 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ELOA3DA6NLF2 546 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SOCS6O14544 535 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PLSCR1O15162 318 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RAD51BO15315 384 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ATP6V1G1O75348 118 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ITGAVP06756 1048 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ACADLP28330 430 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LRRC63Q05C16 580 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PMPCAQ10713 525 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SNRNP35Q16560 246 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ELOA3BQ3SY89 546 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LRRC34Q8IZ02 419 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ELOA3Q8NG57 546 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 FBXW5Q969U6 566 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ARSGQ96EG1 525 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CDHR5Q9HBB8 845 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MFHAS1Q9Y4C4 1052 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF451Q9Y4E5 1061 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 QRICH2Q9H0J4 1663 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CDK12Q9NYV4 1490 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PSMD3O43242 534 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR1F1O43749 312 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 IFNA6P05013 189 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PRB4P10163 310 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HNRNPLP14866 589 aaKnown RBP eCLIP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MLLT3P42568 568 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 GPR85P60893 370 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CD47Q08722 323 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ITGA9Q13797 1035 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHG4Q58EX7 1191 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RNF111Q6ZNA4 994 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 IKBIPQ70UQ0 350 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LPCAT2Q7L5N7 544 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OTOP1Q7RTM1 612 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF248Q8NDW4 579 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PSMA8Q8TAA3 256 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PRICKLE1Q96MT3 831 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CNPY3Q9BT09 278 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 FOXP3Q9BZS1 431 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 EHD4Q9H223 541 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ADAM30Q9UKF2 790 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CAMK2AQ9UQM7 478 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 A0A1W2PQH9 124 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 GSC2O15499 205 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PIGNO95427 931 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 THEGLP0DJG4 465 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CYP2A7P20853 494 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RPL22P35268 128 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NDST1P52848 882 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 EXOSC2Q13868 293 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MLC1Q15049 377 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ANKRD26P1Q6NSI1 321 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CRYBG2Q8N1P7 616 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 GPR151Q8TDV0 419 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 KCNK16Q96T55 309 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MED31Q9Y3C7 131 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM2Q9UHN6 1383 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SCN10AQ9Y5Y9 1956 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ARPC2O15144 300 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PGLSO95336 258 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SLC7A1P30825 629 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CAP2P40123 477 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TRAF3Q13114 568 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DOC2AQ14183 400 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 C5orf22Q49AR2 442 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 KIAA0319Q5VV43 1072 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LINGO2Q7L985 606 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NUP54Q7Z3B4 507 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HSD17B13Q7Z5P4 300 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RHOT2Q8IXI1 618 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR10H4Q8NGA5 316 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 FEZF2Q8TBJ5 459 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NECAB3Q96P71 396 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TCF25Q9BQ70 676 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 AP1G1O43747 822 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HEXBP07686 556 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 UGT2B15P54855 530 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SLC34A1Q06495 639 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TARDBPQ13148 414 aaKnown RBP eCLIP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 EFR3AQ14156 821 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SIM2Q14190 667 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RAD9BQ6WBX8 426 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 C1orf216Q8TAB5 229 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR1F2PQ96R84 312 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF471Q9BX82 626 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CEP44Q9C0F1 390 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CNTD2Q9H8S5 307 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RWDD3Q9Y3V2 267 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CYP3A7-CYP3A51PA0A087WV96 503 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CYP3A7P24462 503 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 AMPD2Q01433 879 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TLE2Q04725 743 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 IL23RQ5VWK5 629 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR52W1Q6IF63 320 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SYCE2Q6PIF2 218 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PLA2G15Q8NCC3 412 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR52L1Q8NGH7 329 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms