RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TXNDC8Q6A555 127 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ENPP6Q6UWR7 440 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 TPGS1Q6ZTW0 290 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 TMCO2Q7Z6W1 182 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 OSCP1Q8WVF1 389 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 TMBIM1Q969X1 311 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 CLSTN3Q9BQT9 956 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 BDH2Q9BUT1 245 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 SEZ6LQ9BYH1 1024 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 FAM126AQ9BYI3 521 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 PCDH10Q9P2E7 1040 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 OPTCQ9UBM4 332 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 TNPO3Q9Y5L0 923 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 SEC22BO75396 215 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 TCF3P15923 654 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 GTDC1Q4AE62 458 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 SLC8B1Q6J4K2 584 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ITIH5Q86UX2 942 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 PROSER1Q86XN7 944 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ERI1Q8IV48 349 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 PHACTR4Q8IZ21 702 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ADGRG2Q8IZP9 1017 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 HS3ST5Q8IZT8 346 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 LIX1Q8N485 282 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 OR10Q1Q8NGQ4 319 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 ULK4Q96C45 1275 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 C12orf43Q96C57 262 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 MUS81Q96NY9 551 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 MUC13Q9H3R2 512 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 CARS2Q9HA77 564 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 PREBQ9HCU5 417 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 HEBP1Q9NRV9 189 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 MTRRQ9UBK8 725 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 LIMD1Q9UGP4 676 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 YIPF1Q9Y548 306 aa15.41■□□□□ 0.06
ARHGEF40-203ENST00000554514 KCNH1O95259 989 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 RGS4P49798 205 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.062e-9■■■□□ 15.7
ARHGEF40-203ENST00000554514 LRRC73Q5JTD7 316 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 SPANXN4Q5MJ08 99 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 TSPAN33Q86UF1 283 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PIH1D2Q8WWB5 315 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 GAB3Q8WWW8 586 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 NCLNQ969V3 563 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 NPLQ9BXD5 320 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 NAA50Q9GZZ1 169 aaKnown RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 IKZF5Q9H5V7 419 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 IL26Q9NPH9 171 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 MAGEL2Q9UJ55 1249 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ZNF490Q9ULM2 529 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 H7C0S8 307 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PGLSO95336 258 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ANXA6P08133 673 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 UMPSP11172 480 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 COL6A1P12109 1028 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 MTHFRP42898 656 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ZXDBP98169 803 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 TMED1Q13445 227 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 NFATC2Q13469 925 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CHRNA6Q15825 494 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CPSF6Q16630 551 aaKnown RBP eCLIP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ANKRD34AQ69YU3 496 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 KCTD8Q6ZWB6 473 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 GOLM1Q8NBJ4 401 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 SLC13A3Q8WWT9 602 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ITFG2Q969R8 447 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ISG20Q96AZ6 181 aaKnown RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ZBTB18Q99592 522 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 DPY30Q9C005 99 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CWH43Q9H720 699 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CXorf21Q9HAI6 301 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 SRRDQ9UH36 339 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 GNPTGQ9UJJ9 305 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 KRT87PA6NCN2 255 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 GAPDHSO14556 408 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 NOBOXO60393 691 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CDH1P12830 882 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ITGALP20701 1170 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 HNF1BP35680 557 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CHRNB3Q05901 458 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 BCL2L1Q07817 233 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PWP1Q13610 501 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 TMEM26Q6ZUK4 368 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PATL1Q86TB9 770 aaKnown RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 OR2T12Q8NG77 320 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 AURKBQ96GD4 344 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ING2Q9H160 280 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 ADNPQ9H2P0 1102 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PKD2L2Q9NZM6 624 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CLEC4EQ9ULY5 219 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PCDHB3Q9Y5E6 796 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 PCDHB1Q9Y5F3 818 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
ARHGEF40-203ENST00000554514 KLHL33A6NCF5 533 aa15.39■□□□□ 0.05
ARHGEF40-203ENST00000554514 LOC730098B7Z3J9 87 aa15.39■□□□□ 0.05
ARHGEF40-203ENST00000554514 GNGT2O14610 69 aa15.39■□□□□ 0.05
ARHGEF40-203ENST00000554514 GSNP06396 782 aa15.39■□□□□ 0.05
ARHGEF40-203ENST00000554514 MAPKAPK3Q16644 382 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms