RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MAGEB10Q96LZ2 347 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF512Q96ME7 567 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PTCHD1Q96NR3 888 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GCNAQ96QF7 691 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 INTS14Q96SY0 518 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EFHD1Q9BUP0 239 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DCLK3Q9C098 648 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RAB33BQ9H082 229 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CDT1Q9H211 546 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TPK1Q9H3S4 243 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RIMS4Q9H426 269 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 METTL7AQ9H8H3 244 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 IL21RQ9HBE5 538 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PARVBQ9HBI1 364 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HEBP1Q9NRV9 189 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KLC4Q9NSK0 619 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PCMTD2Q9NV79 361 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HCFC1R1Q9NWW0 138 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RAB20Q9NX57 234 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GALNT8Q9NY28 637 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CACNA2D2Q9NY47 1150 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CHRNA9Q9UGM1 479 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CD300AQ9UGN4 299 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GGA2Q9UJY4 613 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ITGA11Q9UKX5 1188 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CHMP2BQ9UQN3 213 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HES2Q9Y543 173 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 LRRC42Q9Y546 428 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 YIPF1Q9Y548 306 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MUC22E2RYF6 1773 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NYNRINQ9P2P1 1898 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZFHX2Q9C0A1 2572 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SPTBN4Q9H254 2564 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 A0A1W2PN81 502 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 BCLAF3A2AJT9 711 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CASTOR2A6NHX0 329 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 OR6C76A6NM76 312 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EIF4E1BA6NMX2 242 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MEI4A8MW99 385 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 H0YJX3 145 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PIRO00625 290 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CASC3O15234 703 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TGFB1I1O43294 461 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CTIFO43310 598 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SPAG6O75602 509 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PRPF6O94906 941 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SEMA3DO95025 777 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MFN2O95140 757 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 LCA5LO95447 670 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 OTCP00480 354 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CKMP06732 381 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 IGFBP1P08833 259 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RALBP11234 206 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KRT3P12035 628 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PCSK2P16519 638 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 POLR2EP19388 210 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TNNI3P19429 210 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CHRNA7P36544 502 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MDH1P40925 334 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CTSOP43234 321 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SLC15A1P46059 708 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 AGFG1P52594 562 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EPHB3P54753 998 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CCZ1BP86790 482 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CCZ1P86791 482 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 GSTM4Q03013 218 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KLC1Q07866 573 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SYT16Q17RD7 645 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PRSS53Q2L4Q9 553 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PLK5Q496M5 336 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SLC9B1Q4ZJI4 515 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TAF1BQ53T94 588 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C6orf183Q5T699 404 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PRAMEF20Q5VT98 475 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DAB2IPQ5VWQ8 1189 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 EEF1DP3Q658K8 133 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ATG16L1Q676U5 607 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C18orf63Q68DL7 685 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP17Q68EM7 881 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF425Q6IV72 752 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KIAA1161Q6NSJ0 714 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TIGD7Q6NT04 549 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KLHL24Q6TFL4 600 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DTHD1Q6ZMT9 781 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 MSANTD1Q6ZTZ1 278 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF438Q7Z4V0 828 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SLC51BQ86UW2 128 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 VASH2Q86V25 355 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KIF18BQ86Y91 864 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CDKL3Q8IVW4 592 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KIRREL3Q8IZU9 778 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 RTL3Q8N8U3 475 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KDM1BQ8NB78 822 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PSD4Q8NDX1 1056 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF397Q8NF99 534 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 OR8K1Q8NGG5 319 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF596Q8TC21 504 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SCFD1Q8WVM8 642 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CPT1BQ92523 772 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms