RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SARNPP82979 210 aaKnown RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 PDE1BQ01064 536 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 CDH17Q12864 832 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 MRPL49Q13405 166 aaKnown RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 DNASE1L3Q13609 305 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 GALNT3Q14435 633 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 KIR2DS5Q14953 304 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 TRIP13Q15645 432 aaPredicted RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 TPSAB1Q15661 275 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 SIRPB2Q5JXA9 342 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ZDHHC20Q5W0Z9 365 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 LRRC66Q68CR7 880 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 RAET1GQ6H3X3 334 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 DENND5AQ6IQ26 1287 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 JMJD6Q6NYC1 403 aaPredicted RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 PPP1R21Q6ZMI0 780 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 PCGF5Q86SE9 256 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 PRUNE1Q86TP1 453 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 SLC25A41Q8N5S1 370 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 AVL9Q8NBF6 648 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 GALNT6Q8NCL4 622 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 MCUQ8NE86 351 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 BRSK1Q8TDC3 778 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 KLHL6Q8WZ60 621 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 FCRL4Q96PJ5 515 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 KRT12Q99456 494 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ABCG8Q9H221 673 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF768Q9H5H4 540 aaKnown RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 STN1Q9H668 368 aaKnown RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 SUDS3Q9H7L9 328 aaPredicted RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 L2HGDHQ9H9P8 463 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 LHX9Q9NQ69 397 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 CASS4Q9NQ75 786 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 OGFRQ9NZT2 677 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 VPS18Q9P253 973 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 SEMA5BQ9P283 1151 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 TBC1D29Q9UFV1 150 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ASIC3Q9UHC3 531 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 SRPK3Q9UPE1 567 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 TMEM98Q9Y2Y6 226 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF711Q9Y462 761 aa7.58□□□□□ -1.2
ABCD4-220ENST00000553998 PCYT1BQ9Y5K3 369 aaPredicted RBP7.58□□□□□ -1.2
ABCD4-220ENST00000553998 C1orf232A0A0U1RR37 186 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 C2orf81A6NN90 581 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 DNALI1O14645 258 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TTI1O43156 1089 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 KIAA0754O94854 1291 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CBX6O95503 412 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CRTAMO95727 393 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 MLNP12872 115 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 F3P13726 295 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 SLC2A4P14672 509 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 XRCC1P18887 633 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 LPOP22079 712 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 IVDP26440 423 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 HMGCLP35914 325 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 GPR1P46091 355 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 LEPRP48357 1165 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 VPS41P49754 854 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 DCDC1P59894 354 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PTSQ03393 145 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 FOXM1Q08050 763 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 C2orf54Q08AI8 447 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 MSLNQ13421 630 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 NFATC2Q13469 925 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 SPARCL1Q14515 664 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 KCNJ11Q14654 390 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TAF1AQ15573 450 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 GLE1Q53GS7 698 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 LRRC8BQ6P9F7 803 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF517Q6ZMY9 492 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PRSS42Q7Z5A4 293 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TMC3Q7Z5M5 1100 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TSPAN33Q86UF1 283 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 HOOK3Q86VS8 718 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 BPHLQ86WA6 291 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 GALNT13Q8IUC8 556 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PPIL6Q8IXY8 311 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 MMGT1Q8N4V1 131 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TAB3Q8N5C8 712 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 DNAAF3Q8N9W5 541 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 BBOF1Q8ND07 529 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 DTX3LQ8TDB6 740 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 BLOC1S5Q8TDH9 187 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CT55Q8WUE5 264 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CPT1BQ92523 772 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PEX13Q92968 403 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PNPLA2Q96AD5 504 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 STAMBPL1Q96FJ0 436 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 BARD1Q99728 777 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 APOL2Q9BQE5 337 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 ERP44Q9BS26 406 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 SLC25A23Q9BV35 468 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 TBC1D10AQ9BXI6 508 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 SLC29A3Q9BZD2 475 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 GPR63Q9BZJ6 419 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 RMI1Q9H9A7 625 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms