RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 MRPL9Q9BYD2 267 aaKnown RBP8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 OR2B2Q9GZK3 357 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 EPS8L2Q9H6S3 715 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 CWH43Q9H720 699 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 UBA2Q9UBT2 640 aaPredicted RBP8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 BOLA1Q9Y3E2 137 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
AL049839.2-201ENST00000553947 TCAF2A6NFQ2 919 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 PITPNM1O00562 1244 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 B4GAT1O43505 415 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 KDELR3O43731 214 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SIX3O95343 332 aaPredicted RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CD160O95971 181 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CCDC159P0C7I6 412 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 HDCP19113 662 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 MYF6P23409 242 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SLC11A2P49281 568 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CDH13P55290 713 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 LSM3P62310 102 aaKnown RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SPCS2Q15005 226 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 OR4D1Q15615 310 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SETMARQ53H47 684 aaPredicted RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 LAYNQ6UX15 382 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 LINGO4Q6UY18 593 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 GK5Q6ZS86 529 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SLAIN1Q8ND83 568 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 GPR150Q8NGU9 434 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 ATL1Q8WXF7 558 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF599Q96NL3 588 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 DHRS9Q9BPW9 319 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 TMEM246Q9BRR3 403 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CINPQ9BW66 212 aaPredicted RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 SOX17Q9H6I2 414 aaPredicted RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 RUBCNLQ9H714 662 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CATSPERZQ9NTU4 200 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 IKZF3Q9UKT9 509 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 AGO1Q9UL18 857 aaKnown RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CNOT6Q9ULM6 557 aaKnown RBP8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 MED16Q9Y2X0 877 aa8.9□□□□□ -0.99
AL049839.2-201ENST00000553947 CBX4O00257 560 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SUPT7LO94864 414 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 BMP1P13497 986 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 IMPDH1P20839 514 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 PTGS2P35354 604 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ETV3P41162 512 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ALDH7A1P49419 539 aaKnown RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF140P52738 457 aaPredicted RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 GRSF1Q12849 480 aaKnown RBP eCLIP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 PLD1Q13393 1074 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 UNC50Q53HI1 259 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF678Q5SXM1 525 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 TOR1AIP2Q8NFQ8 470 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 OR4K2Q8NGD2 314 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 OR13F1Q8NGS4 319 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF296Q8WUU4 475 aaPredicted RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 RMDN1Q96DB5 314 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ASB9Q96DX5 294 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 TXNDC15Q96J42 360 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 YME1L1Q96TA2 773 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 EMILIN2Q9BXX0 1053 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SCUBE2Q9NQ36 999 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SMPD4Q9NXE4 827 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 IFT80Q9P2H3 777 aaPredicted RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 GALPQ9UBC7 116 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 LAMA3Q16787 3333 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ATP6AP2A0A1C7CYW4 349 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 TRPC5OSA6NMA1 111 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 CENPXA8MT69 81 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 UBXN8O00124 270 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 INSIG1O15503 277 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 HOXA2O43364 376 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SCO2O43819 266 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ATP6AP2O75787 350 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 F11P03951 625 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 UGT2B4P06133 528 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 RHOCP08134 193 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF37AP17032 561 aaPredicted RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 STC1P52823 247 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 PSME3P61289 254 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ARF5P84085 180 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 CXorf57Q6NSI4 855 aaKnown RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 MRNIPQ6NTE8 343 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 FKBP9P1Q75LS8 142 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 IGSF21Q96ID5 467 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SLC22A12Q96S37 553 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ARMC1Q9NVT9 282 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 UCKL1Q9NWZ5 548 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ADPRHL2Q9NX46 363 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 ZNF221Q9UK13 617 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 TESMINQ9Y4I5 508 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 E7ENX8 843 aa8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 SYNCRIPO60506 623 aaKnown RBP8.89□□□□□ -0.99
AL049839.2-201ENST00000553947 BCAS1O75363 584 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms