RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 KLHL35Q6PF15 583 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 WASH2PQ6VEQ5 465 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SPRED1Q7Z699 444 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SFRP1Q8N474 314 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 PHC3Q8NDX5 983 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MCUQ8NE86 351 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 HM13Q8TCT9 377 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SLC37A2Q8TED4 501 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 ZCCHC14Q8WYQ9 949 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 ABHD17AQ96GS6 310 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CCM2Q9BSQ5 444 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MRM3Q9HC36 420 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 WASH6PQ9NQA3 447 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 PRDM8Q9NQV8 689 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CHRAC1Q9NRG0 131 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 KCND1Q9NSA2 647 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CPNE7Q9UBL6 633 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 HEBP2Q9Y5Z4 205 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 COLEC10Q9Y6Z7 277 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 LRRK1Q38SD2 2015 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 DNAH14Q0VDD8 3507 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC187A0A096LP49 1063 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 C17orf113A0A1B0GUU1 675 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC162PA2VCL2 907 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 AGAP14A8MT82 685 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 D6RAR5 112 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 GOLGA8MH3BSY2 632 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 KIF2AO00139 706 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 GAPDHSO14556 408 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 GPR39O43194 453 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 POLBP06746 335 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 JMJD7P0C870 316 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 XRCC1P18887 633 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CD33P20138 364 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 NDUFS1P28331 727 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 MAGEA6P43360 314 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PRLHRP49683 370 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CTSCP53634 463 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 DRG2P55039 364 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CLDN6P56747 220 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 OR1D5P58170 312 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 GABREP78334 506 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PLOD1Q02809 727 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 DMPKQ09013 629 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 MSLNQ13421 630 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PTK6Q13882 451 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 DHX34Q14147 1143 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 KCNJ11Q14654 390 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 TMED2Q15363 201 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 RNF187Q5TA31 235 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CDCP2Q5VXM1 449 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 IZUMO3Q5VZ72 239 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PTRHD1Q6GMV3 140 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 ABRAXAS1Q6UWZ7 409 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 SYT10Q6XYQ8 523 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 C17orf82Q86X59 251 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CREG2Q8IUH2 290 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF547Q8IVP9 402 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CFAP206Q8IYR0 622 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 MPP5Q8N3R9 675 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 FBXO39Q8N4B4 442 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 BBOF1Q8ND07 529 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 OR2L2Q8NH16 312 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 WDR36Q8NI36 951 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PATE1Q8WXA2 126 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CPT1BQ92523 772 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 NCSTNQ92542 709 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 LINC00615Q96LM1 132 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 NSUN5Q96P11 429 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 CMKLR1Q99788 373 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 POLR1BQ9H9Y6 1135 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 THSD1Q9NS62 852 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 IMP3Q9NV31 184 aaKnown RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 SLC23A2Q9UGH3 650 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 TMPRSS11EQ9UL52 423 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 ATXN7L1Q9ULK2 861 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-209ENST00000553855 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
PSEN1-209ENST00000553855 PSMD13Q9UNM6 376 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms