RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMEM191CA6NGB0 347 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CHUKO15111 745 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 DAPK3O43293 454 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 GRID2O43424 1007 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CLDN7O95471 211 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 FOLR1P15328 257 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 TCF4P15884 667 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF8P17098 575 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 LPOP22079 712 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 IL1R2P27930 398 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 SPINT3P49223 89 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CDH6P55285 790 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 RIPPLY3P57055 190 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 TUBB3Q13509 450 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 GPR18Q14330 331 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 KRT31Q15323 416 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CACHD1Q5VU97 1274 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ACAD10Q6JQN1 1059 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 FAM199XQ6PEV8 388 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 TMCO3Q6UWJ1 677 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 FAM92BQ6ZTR7 304 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 POLNQ7Z5Q5 900 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 BBS5Q8N3I7 341 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 FDCSPQ8NFU4 85 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 EID2BQ96D98 161 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 C19orf60Q96EN9 201 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 FCRL4Q96PJ5 515 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 CSPG4P5Q96PW8 444 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 NUDT9Q9BW91 350 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 RAB33BQ9H082 229 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ZWILCHQ9H900 591 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ARFGAP3Q9NP61 516 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 NT5MQ9NPB1 228 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ACSS2Q9NR19 701 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 KLC4Q9NSK0 619 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 POT1Q9NUX5 634 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 SEPT11Q9NVA2 429 aaKnown RBP7.13□□□□□ -1.27
ATXN3-219ENST00000553488 DTLQ9NZJ0 730 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 VTI1BQ9UEU0 232 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 SLC23A2Q9UGH3 650 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 DNPEPQ9ULA0 475 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF451Q9Y4E5 1061 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 MYO7BQ6PIF6 2116 aa7.13□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 IGHV5-51A0A0C4DH38 117 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 C1orf232A0A0U1RR37 186 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SSU72P8A0A1W2PR75 194 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 OR52A4PA6NMU1 304 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 GPR89AB7ZAQ6 455 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 KRT86O43790 486 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 PRPSAP2O60256 369 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 DPM1O60762 260 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 RASSF9O75901 435 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CBX6O95503 412 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 VIPP01282 170 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 PF4P02776 101 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 EBLN1P0CF75 366 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 GPR89BP0CG08 455 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CD8BP10966 210 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ATP1A3P13637 1013 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 PRF1P14222 555 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 DESP17661 470 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 AMD1P17707 334 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ELAVL4P26378 380 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CCL11P51671 97 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ETF1P62495 437 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 DSC2Q02487 901 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 GPS2Q13227 327 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 KCNAB1Q14722 419 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SMTNL2Q2TAL5 461 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF648Q5T619 568 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 MARC1Q5VT66 337 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 IZUMO3Q5VZ72 239 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CRTC3Q6UUV7 619 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ABRAXAS1Q6UWZ7 409 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CERS6Q6ZMG9 384 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 BNC2Q6ZN30 1099 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 C11orf96Q7Z7L8 435 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ADGRG6Q86SQ4 1221 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 HPS6Q86YV9 775 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF547Q8IVP9 402 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 NDUFAF2Q8N183 169 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SLC38A9Q8NBW4 561 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 GPR150Q8NGU9 434 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 ARRDC2Q8TBH0 407 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 GATAD2BQ8WXI9 593 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 MAML1Q92585 1016 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SNRNP40Q96DI7 357 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 RANBP9Q96S59 729 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SMAD5Q99717 465 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 BARD1Q99728 777 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 TIMM29Q9BSF4 260 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 POLR1EQ9GZS1 481 aaKnown RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 OR2AG1Q9H205 316 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 OSGEPL1Q9H4B0 414 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 PDE7BQ9NP56 450 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms