RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 WNT5BQ9H1J7 359 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 CHCHD3Q9NX63 227 aaKnown RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 SLC24A2Q9UI40 661 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 OR52Z1P0C646 297 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 GP5P40197 560 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 PLA2G7Q13093 441 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 ZNF273Q14593 569 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 C9orf57Q5W0N0 161 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 PLA2G4FQ68DD2 849 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.93□□□□□ -1.62
SYNE2-210ENST00000553455 PLEKHM3Q6ZWE6 761 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 TMPRSS11FQ6ZWK6 438 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 ERN2Q76MJ5 926 aaKnown RBP4.93□□□□□ -1.62
SYNE2-210ENST00000553455 C16orf82Q7Z2V1 217 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 DNAJB7Q7Z6W7 309 aaPredicted RBP4.93□□□□□ -1.62
SYNE2-210ENST00000553455 SFR1Q86XK3 245 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
SYNE2-210ENST00000553455 DAZLQ92904 295 aaKnown RBP4.93□□□□□ -1.62
SYNE2-210ENST00000553455 TTC14Q96N46 770 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 TM6SF1Q9BZW5 370 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 CD93Q9NPY3 652 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 GRIP1Q9Y3R0 1128 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 NME7Q9Y5B8 376 aa4.93□□□□□ -1.62
SYNE2-210ENST00000553455 IGHV4OR15-8A0A075B7B6 117 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 A0A1W2PPQ1 181 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 CCDC188H7C350 402 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 TSPAN1O60635 241 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 PENKP01210 267 aaPredicted RBP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 FDPSP14324 419 aaKnown RBP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 HOXC8P31273 242 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 AHRP35869 848 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 MTHFRP42898 656 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 FUT6P51993 359 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 LIMK1P53667 647 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 RBPJQ06330 500 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 PPIGQ13427 754 aaKnown RBP eCLIP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 KLC3Q6P597 504 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 FAM171BQ6P995 826 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 GLRX5Q86SX6 157 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 PTOV1Q86YD1 416 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 SLAMF9Q96A28 289 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 MTERF3Q96E29 417 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 LINGO1Q96FE5 620 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 MED30Q96HR3 178 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 SPATA17Q96L03 361 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 MUS81Q96NY9 551 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 RAB3IPQ96QF0 476 aaPredicted RBP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 ZPBPQ9BS86 351 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 TRPC7Q9HCX4 862 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 MYNNQ9NPC7 610 aa4.92□□□□□ -1.62
SYNE2-210ENST00000553455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 SPIN1Q9Y657 262 aaPredicted RBP4.92□□□□□ -1.62
SYNE2-210ENST00000553455 A0A0G2JNG1 304 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 ELOVL7A1L3X0 281 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 C15orf62A8K5M9 175 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 LACTBL1A8MY62 500 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 CCER2I3L3R5 266 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 PAPSS2O95340 614 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 LIPFP07098 398 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 KRT19P08727 400 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 RAB40ALP0C0E4 278 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 ACP2P11117 423 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 CSF2RAP15509 400 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 MCCP23508 829 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 MPZP25189 248 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 PSMC4P43686 418 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 ZNF75DP51815 510 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 EEF1A1P68104 462 aaKnown RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 RBP5P82980 135 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 RPL24P83731 157 aaKnown RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 KIR2DS5Q14953 304 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 KIF19Q2TAC6 998 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 EEF1A1P5Q5VTE0 462 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 KRT39Q6A163 491 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 PPP1R21Q6ZMI0 780 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 FAM114A1Q8IWE2 563 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 L3MBTL4Q8NA19 623 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 SLC4A11Q8NBS3 891 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 OR5M8Q8NGP6 311 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 ATL1Q8WXF7 558 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 SORCS1Q8WY21 1168 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 LYZL4Q96KX0 146 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 ZNF558Q96NG5 402 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 BTBD10Q9BSF8 475 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 LMF2Q9BU23 707 aaKnown RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 Q9N2K0 584 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 DPP3Q9NY33 737 aa4.91□□□□□ -1.62
SYNE2-210ENST00000553455 NOL7Q9UMY1 257 aaKnown RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 SOS1Q07889 1333 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-210ENST00000553455 SAA2-SAA4A0A096LPE2 208 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 TULP2O00295 520 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 MEIS2O14770 477 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 INSIG1O15503 277 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 TFAP2AP05549 437 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ATP5BP06576 529 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ZNF23P17027 643 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 CBLP22681 906 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 FOXG1P55316 489 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms