RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 SPNS2Q8IVW8 549 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 DENND6AQ8IWF6 608 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 TRIM48Q8IWZ4 208 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 RBM12BQ8IXT5 1001 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 LSMEM2Q8N112 164 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 KRT222Q8N1A0 295 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 FBXO39Q8N4B4 442 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 AVL9Q8NBF6 648 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 ELMO1Q92556 727 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 RSC1A1Q92681 617 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 FGF11Q92914 225 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 AHCYL2Q96HN2 611 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 C16orf45Q96MC5 204 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 C12orf66Q96MD2 445 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 WDR83Q9BRX9 315 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 CARD6Q9BX69 1037 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 TRIM31Q9BZY9 425 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 POT1Q9NUX5 634 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 IMP3Q9NV31 184 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 OCIAD1Q9NX40 245 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 SLC24A2Q9UI40 661 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 ANAPC5Q9UJX4 755 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 SNX24Q9Y343 169 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 LOXL2Q9Y4K0 774 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 PCDHGA8Q9Y5G5 932 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 MAD1L1Q9Y6D9 718 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 RPS6KL1Q9Y6S9 549 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 LOC400499M0QZD8 3231 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 MYLKQ15746 1914 aa6.33□□□□□ -1.4
TMEM106C-215ENST00000550552 ZFYVE26Q68DK2 2539 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 UNC13CQ8NB66 2214 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 OR6C74A6NCV1 312 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 QSOX1O00391 747 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 LIN7AO14910 233 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 CAPN5O15484 640 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 RAD51CO43502 376 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 DUX1O43812 170 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 NDUFS3O75489 264 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 KRT37O76014 449 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 USP1O94782 785 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 HAUS5O94927 633 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 SLCO2B1O94956 709 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 FTH1P02794 183 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ITGA2BP08514 1039 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 GSTM1P09488 218 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ERVK-10P10266 1014 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 AMD1P17707 334 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 RPS3P23396 243 aaKnown RBP eCLIP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ITPKBP27987 946 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 GABRB3P28472 473 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 RBMS1P29558 406 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 SLC5A2P31639 672 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PPARGP37231 505 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 CAPZBP47756 277 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PPM1FP49593 454 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ITGA8P53708 1063 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 CSE1LP55060 971 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ADARP55265 1226 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 EIF3BP55884 814 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ERVPABLB-1P60509 514 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 GSTM4Q03013 218 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 C2orf54Q08AI8 447 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PRKG2Q13237 762 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 EIF3IQ13347 325 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 TRA2AQ13595 282 aaKnown RBP eCLIP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 MORF4L2Q15014 288 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 TYSND1Q2T9J0 566 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 AARS2Q5JTZ9 985 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 DUPD1Q68J44 220 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 MRNIPQ6NTE8 343 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ZNF549Q6P9A3 640 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ZNF572Q7Z3I7 529 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PCGF5Q86SE9 256 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 SDCCAG8Q86SQ7 713 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 CLEC14AQ86T13 490 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 CILP2Q8IUL8 1156 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 OTUD6BQ8N6M0 293 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 BMPERQ8N8U9 685 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 OR4E2Q8NGC2 313 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 OR5AR1Q8NGP9 310 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ZFPM2Q8WW38 1151 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 LPGAT1Q92604 370 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 TFGQ92734 400 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 USP7Q93009 1102 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ZNF669Q96BR6 464 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 STAMBPL1Q96FJ0 436 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 SNF8Q96H20 258 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 C9orf72Q96LT7 481 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 PPM1MQ96MI6 270 aa6.32□□□□□ -1.4
TMEM106C-215ENST00000550552 ZNF578Q96N58 590 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms