RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 OR4E2Q8NGC2 313 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 ZNF398Q8TD17 642 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 CTNNBL1Q8WYA6 563 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 C19orf60Q96EN9 201 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 C12orf66Q96MD2 445 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 GBP4Q96PP9 640 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 CCM2Q9BSQ5 444 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 DHRS4Q9BTZ2 278 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 WWP1Q9H0M0 922 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 FANCEQ9HB96 536 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 UBP1Q9NZI7 540 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 FAM153AQ9UHL3 310 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 POMT2Q9UKY4 750 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC5A6Q9Y289 635 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 B3GNT3Q9Y2A9 372 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 LUC7L2Q9Y383 392 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 CFAP20Q9Y6A4 193 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 DOPEY1Q5JWR5 2465 aa9.58□□□□□ -0.88
TRAFD1-207ENST00000550051 ANKRD12Q6UB98 2062 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 LRRD1A4D1F6 860 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SGTAO43765 313 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 KRT86O43790 486 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 KLF7O75840 302 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 MBD3O95983 291 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 IGHEP01854 428 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 CD63P08962 238 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 HBQ1P09105 142 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 POLR2CP19387 275 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PTPN3P26045 913 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PRDX3P30048 256 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ARHGAP25P42331 645 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PREPP48147 710 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SOX8P57073 446 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 WASHC5Q12768 1159 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PRKAA1Q13131 559 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 MESDQ14696 234 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 NCF4Q15080 339 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PRKD1Q15139 912 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC1A5Q15758 541 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 BCL7AQ4VC05 210 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ZRANB3Q5FWF4 1079 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 VWA5B1Q5TIE3 1220 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 FBXO38Q6PIJ6 1188 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 FAM198BQ6UWH4 519 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 NPNTQ6UXI9 565 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 FAM151BQ6UXP7 276 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SYTL1Q8IYJ3 562 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC34A3Q8N130 599 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 CISD2Q8N5K1 135 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ACVR1CQ8NER5 493 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 OR1L3Q8NH93 324 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 CPLX3Q8WVH0 158 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SGSM3Q96HU1 749 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 FER1L6-AS2Q96M78 137 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 C5orf34Q96MH7 638 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PPM1MQ96MI6 270 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 FCRL5Q96RD9 977 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 C17orf62Q9BQA9 187 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PITPNM3Q9BZ71 974 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ACTR5Q9H9F9 607 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 ASF1BQ9NVP2 202 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 SOHLH2Q9NX45 425 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 LUZP4Q9P127 313 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PKP3Q9Y446 797 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 HEBP2Q9Y5Z4 205 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 PCSK5Q92824 1860 aa9.57□□□□□ -0.88
TRAFD1-207ENST00000550051 MDC1Q14676 2089 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 C17orf113A0A1B0GUU1 675 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 AGAP14A8MT82 685 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 IPO13O94829 963 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 LCA5LO95447 670 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC35G4P0C7Q5 338 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 MSH3P20585 1137 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 CYP2A7P20853 494 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 AGXTP21549 392 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 CDH3P22223 829 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 CHRNA4P43681 627 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 ATP1A4Q13733 1029 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 KRT33BQ14525 404 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 MYBPC3Q14896 1274 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 NOMO1Q15155 1222 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 NR6A1Q15406 480 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC18A3Q16572 532 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 TAZQ16635 292 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 ASTE1Q2TB18 679 aaPredicted RBP9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 FAM69BQ5VUD6 431 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 RAB43Q86YS6 212 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 CFAP206Q8IYR0 622 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 SLC35G2Q8TBE7 412 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 TFB1MQ8WVM0 346 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 VAT1Q99536 393 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 C19orf43Q9BQ61 176 aa9.56□□□□□ -0.88
TRAFD1-207ENST00000550051 TLR10Q9BXR5 811 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms