RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 RARRES3Q9UL19 164 aa13.09□□□□□ -0.31
GCN1-206ENST00000549815 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
GCN1-206ENST00000549815 OR6C74A6NCV1 312 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 GOLGA6L9A6NEM1 432 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 CFAP99D6REC4 459 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 AP2A1O95782 977 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 RECKO95980 971 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 MT-ND3P03897 115 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 RALBP11234 206 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 TPH1P17752 444 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 NDUFS1P28331 727 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 CSRP3P50461 194 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 BPHLQ86WA6 291 aaPredicted RBP13.08□□□□□ -0.32
GCN1-206ENST00000549815 PIANPQ8IYJ0 282 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 CARFQ8N187 725 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 CT55Q8WUE5 264 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
GCN1-206ENST00000549815 ZNF501Q96CX3 271 aaPredicted RBP13.08□□□□□ -0.32
GCN1-206ENST00000549815 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 CLMPQ9H6B4 373 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 LRRC40Q9H9A6 602 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 FGF21Q9NSA1 209 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 KCND3Q9UK17 655 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 PADI1Q9ULC6 663 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 COLEC10Q9Y6Z7 277 aa13.08□□□□□ -0.32
GCN1-206ENST00000549815 UBA6A0AVT1 1052 aaPredicted RBP13.07□□□□□ -0.32
GCN1-206ENST00000549815 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
GCN1-206ENST00000549815 CCNYL3P0C7X3 344 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 PDHA2P29803 388 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 ARCN1P48444 511 aaKnown RBP13.07□□□□□ -0.32
GCN1-206ENST00000549815 HSD11B2P80365 405 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 KCNC4Q03721 635 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 DNASE1L3Q13609 305 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 GSE1Q14687 1217 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 POU6F1Q14863 301 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 DBN1Q16643 649 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 P3H1Q32P28 736 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 ZRANB3Q5FWF4 1079 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
GCN1-206ENST00000549815 CLDN19Q8N6F1 224 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 ACVR1CQ8NER5 493 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 LRRC45Q96CN5 670 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 RUFY1Q96T51 708 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 NRTNQ99748 197 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
GCN1-206ENST00000549815 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 HEBP2Q9Y5Z4 205 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 PRSS21Q9Y6M0 314 aa13.07□□□□□ -0.32
GCN1-206ENST00000549815 C21orf140B9A014 251 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 BTN3A3O00478 584 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 KATNA1O75449 491 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 CREG1O75629 220 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 NTRK1P04629 796 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 CDC25BP30305 580 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 CD151P48509 253 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 TUBB4BP68371 445 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 CACNG1Q06432 222 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 TUBB2AQ13885 445 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 ERV3-1Q14264 604 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 OASLQ15646 514 aaKnown RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 GPR19Q15760 415 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 ZNF517Q6ZMY9 492 aaPredicted RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 OR4E2Q8NGC2 313 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 C9orf43Q8TAL5 461 aaPredicted RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 ATG4AQ8WYN0 398 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 FERD3LQ96RJ6 166 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 TUBB2BQ9BVA1 445 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 TFB2MQ9H5Q4 396 aaKnown RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 ZNF71Q9NQZ8 489 aaPredicted RBP13.06□□□□□ -0.32
GCN1-206ENST00000549815 LATS2Q9NRM7 1088 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 C1GALT1Q9NS00 363 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 SPTBP11277 2137 aa13.06□□□□□ -0.32
GCN1-206ENST00000549815 MATN2O00339 956 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 BTN3A1O00481 513 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 PSMD3O43242 534 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 SCRG1O75711 98 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 SUN1O94901 812 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 AP2A2O94973 939 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 PTMAP06454 111 aaKnown RBP13.05□□□□□ -0.32
GCN1-206ENST00000549815 FOXN2P32314 431 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 PREPP48147 710 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 ARL4DP49703 201 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 RPA4Q13156 261 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 BOP1Q14137 746 aaKnown RBP13.05□□□□□ -0.32
GCN1-206ENST00000549815 ITIH4Q14624 930 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
GCN1-206ENST00000549815 ZNF789Q5FWF6 425 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms