RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PDZD3Q86UT5 571 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 OOSP2Q86WS3 158 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 ACVR1CQ8NER5 493 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 INSM2Q96T92 566 aaPredicted RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 CMKLR1Q99788 373 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 P2RY12Q9H244 342 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 IL1RAPL1Q9NZN1 696 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 SCHIP1Q9P0W5 487 aaPredicted RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 ZNF624Q9P2J8 865 aaPredicted RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 CORO1CQ9ULV4 474 aaPredicted RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 WDR37Q9Y2I8 494 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 CFAP20Q9Y6A4 193 aaKnown RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 AK5Q9Y6K8 562 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 ESYT3A0FGR9 886 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 FAM149AA5PLN7 773 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 D6RAR5 112 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 B4GAT1O43505 415 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 S1PR4O95977 384 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 BRAFP15056 766 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 CCR7P32248 378 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 MAGEA4P43358 317 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 LEPRP48357 1165 aaKnown RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 RGS4P49798 205 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TRA2AQ13595 282 aaKnown RBP eCLIP17.08■□□□□ 0.32
CD9-211ENST00000546073 ISXQ2M1V0 245 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TMEM71Q6P5X7 295 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 ZNF761Q86XN6 746 aaPredicted RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TBC1D21Q8IYX1 336 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 DCBLD1Q8N8Z6 715 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 C2CD4AQ8NCU7 369 aaPredicted RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 OR4D9Q8NGE8 314 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 LCN9Q8WX39 176 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 NXPE2Q96DL1 559 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 VPS39Q96JC1 886 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 FMO2Q99518 471 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 SRMSQ9H3Y6 488 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TAS2R13Q9NYV9 303 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 TRMT6Q9UJA5 497 aaKnown RBP17.08■□□□□ 0.32
CD9-211ENST00000546073 KLK13Q9UKR3 277 aa17.08■□□□□ 0.32
CD9-211ENST00000546073 SLC5A10A0PJK1 596 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 PRR19A6NJB7 356 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 PCNX2A6NKB5 2137 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 IQCF5A8MTL0 148 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 MATN2O00339 956 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 NTN3O00634 580 aaPredicted RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 AOAHP28039 575 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 RBMS1P29558 406 aaKnown RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 CSTF2P33240 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
CD9-211ENST00000546073 ARL4DP49703 201 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 SQSTM1Q13501 440 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 GPR18Q14330 331 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 CDCP2Q5VXM1 449 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 STEAP4Q687X5 459 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 WDR74Q6RFH5 385 aaPredicted RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 SLC26A11Q86WA9 606 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 NOA1Q8NC60 698 aaKnown RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 CFAP61Q8NHU2 1237 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 KCNJ9Q92806 393 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 OR52A5Q9H2C5 316 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 KIR3DX1Q9H7L2 352 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 KLHL42Q9P2K6 505 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 RABGEF1Q9UJ41 708 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 ATXN7L1Q9ULK2 861 aaPredicted RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 TDRKHQ9Y2W6 561 aaKnown RBP17.07■□□□□ 0.32
CD9-211ENST00000546073 SCN8AQ9UQD0 1980 aa17.07■□□□□ 0.32
CD9-211ENST00000546073 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 FAM221BA6H8Z2 402 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 RASSF9O75901 435 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 HAUS5O94927 633 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 RHOXF2BP0C7M4 288 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 JMJD7P0C870 316 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 TYRP1P17643 537 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 SPINK2P20155 84 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
CD9-211ENST00000546073 CD1CP29017 333 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 PDHA2P29803 388 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 CCNFP41002 786 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 ABRQ12979 859 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 CBLBQ13191 982 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
CD9-211ENST00000546073 SLMAPQ14BN4 828 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 SNAP47Q5SQN1 464 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 TEDDM1Q5T9Z0 273 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 TMEM164Q5U3C3 297 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 NKAIN2Q5VXU1 208 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 FOXR1Q6PIV2 292 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 UNC5DQ6UXZ4 953 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 STRA8Q7Z7C7 330 aa17.06■□□□□ 0.32
CD9-211ENST00000546073 GALNT7Q86SF2 657 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms