RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FIG4Q92562 907 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SGCDQ92629 289 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PDLIM5Q96HC4 596 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 REXO5Q96IC2 774 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 C8orf48Q96LL4 319 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 CEP295NLQ96MC4 621 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 AP5M1Q9H0R1 490 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 GABARAPL1Q9H0R8 117 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 RETREG1Q9H6L5 497 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ASIC5Q9NY37 505 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 VAPAQ9P0L0 249 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 POLR3HQ9Y535 204 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 VWA8A3KMH1 1905 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FAM220BPB1ANY3 271 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 CXCR6O00574 342 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 GPR182O15218 404 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 AQP9O43315 295 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 JRKO75564 520 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 RECQL5O94762 991 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 OTCP00480 354 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 IGLV3-27P01718 113 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 RPLP2P05387 115 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 CAPN1P07384 714 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PRSS56P0CW18 603 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 JUNDP17535 347 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ACVR2AP27037 513 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 OR1E1P30953 314 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 DCTP40126 519 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 RXRGP48443 463 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 EIF2B2P49770 351 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 MVKQ03426 396 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 NKG7Q16617 165 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 AP5B1Q2VPB7 878 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FBXO48Q5FWF7 155 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 CTSL3PQ5NE16 218 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ATG9BQ674R7 924 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SPESP1Q6UW49 350 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ADAMTSL2Q86TH1 951 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SLCO6A1Q86UG4 719 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SCN4BQ8IWT1 228 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 MICU2Q8IYU8 434 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 MFSD4AQ8N468 514 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SCAIQ8N9R8 606 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 OR4K2Q8NGD2 314 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FAR1Q8WVX9 515 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 GTF2H4Q92759 462 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FAM162AQ96A26 154 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SLC10A4Q96EP9 437 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 DCAF13Q9NV06 445 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 PAK1IP1Q9NWT1 392 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 EIF3LQ9Y262 564 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 SPO11Q9Y5K1 396 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 DGKBQ9Y6T7 804 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 M0R3G1 203 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 BCKDKO14874 412 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 HS6ST1O60243 411 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 NOBOXO60393 691 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 DFNA5O60443 496 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 NIPSNAP2O75323 286 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 GJB3O75712 270 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 INMTO95050 263 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ESR1P03372 595 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 IL6P05231 212 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 PIRTP0C851 137 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 TGM1P22735 817 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ACVRL1P37023 503 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 HTR6P50406 440 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 DGKQP52824 942 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 PURAQ00577 322 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 RING1Q06587 406 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 KEAP1Q14145 624 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 BCL2A1Q16548 175 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CCDC92Q53HC0 331 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 GOLGA7Q7Z5G4 137 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ARL10Q8N8L6 244 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 SIDT2Q8NBJ9 832 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 RORBQ92753 470 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 EFHD2Q96C19 240 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 RHBDF1Q96CC6 855 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 RPRD1AQ96P16 312 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 PSKH2Q96QS6 385 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 IL37Q9NZH6 218 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 TMEFF2Q9UIK5 374 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 INTS6Q9UL03 887 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 TPRKBQ9Y3C4 175 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CCL27Q9Y4X3 112 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ASB1Q9Y576 335 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 GPC6Q9Y625 555 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms