RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 FCRL4Q96PJ5 515 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 APOL2Q9BQE5 337 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 TWSG1Q9GZX9 223 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 TSPY26PQ9H489 355 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 ASB8Q9H765 288 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 RAB6BQ9NRW1 208 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 FGF21Q9NSA1 209 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 SMOXQ9NWM0 555 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 HRASLS2Q9NWW9 162 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 FAM8A1Q9UBU6 413 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 KCND3Q9UK17 655 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 TLK1Q9UKI8 766 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 TRHDEQ9UKU6 1024 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 PLAAQ9Y263 795 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 PCDHGA6Q9Y5G7 932 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 PCDHA13Q9Y5I0 950 aa8.26□□□□□ -1.09
USP28-215ENST00000545608 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 UBA6A0AVT1 1052 aaPredicted RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 OR6C74A6NCV1 312 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 TLCD2A6NGC4 264 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 C21orf140B9A014 251 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 MKRN2OSH3BPM6 223 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 APOC4-APOC2K7ER74 178 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 DNAJB5O75953 348 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 SRP72O76094 671 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 LCA5LO95447 670 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 PRAMEF1O95521 474 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 RECKO95980 971 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 APOC2P02655 101 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 PDGFAP04085 211 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 POLBP06746 335 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 LPOP22079 712 aaPredicted RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 AKT1P31749 480 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ARL4DP49703 201 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 KPNA2P52292 529 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 RPS18P62269 152 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 KLRB1Q12918 225 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 LAMB3Q13751 1172 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 UBAP2LQ14157 1087 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 TLR1Q15399 786 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 TAF1AQ15573 450 aaPredicted RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 BCL7AQ4VC05 210 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 DNTTIP2Q5QJE6 756 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 PRAMEF17Q5VTA0 474 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 CAPRIN2Q6IMN6 1127 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 TCTN3Q6NUS6 607 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 KMT5CQ86Y97 462 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 CFAP206Q8IYR0 622 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 D2HGDHQ8N465 521 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 OR13C4Q8NGS5 318 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 OR2L2Q8NH16 312 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ACTL9Q8TC94 416 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ZNF501Q96CX3 271 aaPredicted RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 RBM41Q96IZ5 413 aaKnown RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 ZNF514Q96K75 400 aaPredicted RBP8.25□□□□□ -1.09
USP28-215ENST00000545608 RMDN2Q96LZ7 410 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 CD180Q99467 661 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 FSD1LQ9BXM9 530 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 TRIM55Q9BYV6 548 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 GBA3Q9H227 469 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ACTL8Q9H568 366 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 FAM96AQ9H5X1 160 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ANKMY1Q9P2S6 941 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 SLC24A2Q9UI40 661 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 ACSL5Q9ULC5 683 aa8.25□□□□□ -1.09
USP28-215ENST00000545608 CLEC18AA5D8T8 446 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 C5orf60A6NFR6 353 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 C2orf81A6NN90 581 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 AGAP14A8MT82 685 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 CCL22O00626 93 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 NDUFB5O43674 189 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 RFPL1O75677 317 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ANXA9O76027 345 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 POLR2CP19387 275 aaPredicted RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 PSMB4P28070 264 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 PTPN4P29074 926 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 PMS2P54278 862 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 MLLT10P55197 1068 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 HSD11B2P80365 405 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 TMPRSS15P98073 1019 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 OTUD4Q01804 1114 aaKnown RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 GPS2Q13227 327 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 SEMA5AQ13591 1074 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 SPARCL1Q14515 664 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 GPR19Q15760 415 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 TBCELQ5QJ74 424 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 CCDC181Q5TID7 509 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ANKRD20A3Q5VUR7 823 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ITPRIPL1Q6GPH6 555 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 DENND5AQ6IQ26 1287 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 LCN10Q6JVE6 187 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 C11orf63Q6NUN7 778 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ARMC6Q6NXE6 501 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms