RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SESN2P58004 480 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-216ENST00000544989 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 IL11RAQ14626 422 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 MANEAQ5SRI9 462 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 CACHD1Q5VU97 1274 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 IRGCQ6NXR0 463 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 BPHLQ86WA6 291 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-216ENST00000544989 LRRC6Q86X45 466 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 DTX1Q86Y01 620 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 BMPERQ8N8U9 685 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 ACVR1CQ8NER5 493 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 WBP1Q96G27 269 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 PDLIM2Q96JY6 352 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 OSBPL9Q96SU4 736 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 EFHD1Q9BUP0 239 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 OR52A5Q9H2C5 316 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 XAB2Q9HCS7 855 aaKnown RBP11.53□□□□□ -0.56
HDAC4-216ENST00000544989 FOXJ2Q9P0K8 574 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 KLHL3Q9UH77 587 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 SNX12Q9UMY4 172 aa11.53□□□□□ -0.56
HDAC4-216ENST00000544989 MAGEB16A2A368 324 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 OR5K3A6NET4 321 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 TLCD2A6NGC4 264 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 EIF4E1BA6NMX2 242 aaKnown RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 K7ENP7 123 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 ERVH48-1M5A8F1 160 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MAP3K7O43318 606 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 PHF2O75151 1096 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MLNP12872 115 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MAP4P27816 1152 aaKnown RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 COILP38432 576 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 GRIA1P42261 906 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 GFERP55789 205 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 GPS1Q13098 491 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MAP7Q14244 749 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 SYTL3Q4VX76 610 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MRNIPQ6NTE8 343 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 INO80CQ6PI98 192 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 CCDC137Q6PK04 289 aaKnown RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 SDCCAG8Q86SQ7 713 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 CLDN19Q8N6F1 224 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 MCUQ8NE86 351 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 GPR150Q8NGU9 434 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 RSC1A1Q92681 617 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 RMDN2Q96LZ7 410 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 KIFC1Q9BW19 673 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 CHRAC1Q9NRG0 131 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 TREX1Q9NSU2 369 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 CATSPERZQ9NTU4 200 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 HRASLS2Q9NWW9 162 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 OCIAD1Q9NX40 245 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 SAMD15Q9P1V8 674 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 FAM8A1Q9UBU6 413 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 POLG2Q9UHN1 485 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 B3GALT1Q9Y5Z6 326 aa11.52□□□□□ -0.57
HDAC4-216ENST00000544989 CFAP20Q9Y6A4 193 aaKnown RBP11.52□□□□□ -0.57
HDAC4-216ENST00000544989 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 UBA6A0AVT1 1052 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 AGRPO00253 132 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 PRMT5O14744 637 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 KPNA5O15131 536 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 CD3EAPO15446 510 aaKnown RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 RPN2P04844 631 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 NELFEP18615 380 aaKnown RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ARL4DP49703 201 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ACY1Q03154 408 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 KCNJ11Q14654 390 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 TMED2Q15363 201 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ZNF658BQ4V348 819 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 TMTC4Q5T4D3 741 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ARHGAP40Q5TG30 622 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 IL22RA1Q8N6P7 574 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 OR8K5Q8NH50 307 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ASZ1Q8WWH4 475 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 LCN9Q8WX39 176 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 ELMO1Q92556 727 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 TFGQ92734 400 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 FCRL4Q96PJ5 515 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 PANX3Q96QZ0 392 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 TCF12Q99081 682 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 AP1M1Q9BXS5 423 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 SRMSQ9H3Y6 488 aa11.51□□□□□ -0.57
HDAC4-216ENST00000544989 TFB2MQ9H5Q4 396 aaKnown RBP11.51□□□□□ -0.57
HDAC4-216ENST00000544989 PDE7BQ9NP56 450 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms