RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ADAMTS17Q8TE56 1095 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 SLC37A2Q8TED4 501 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 FAR1Q8WVX9 515 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 NUS1Q96E22 293 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PGAP3Q96FM1 320 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ELMO2Q96JJ3 720 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 NT5C1BQ96P26 610 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 OR2M4Q96R27 311 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TUBGCP5Q96RT8 1024 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 WDR77Q9BQA1 342 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ZSWIM1Q9BR11 485 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TEX101Q9BY14 249 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 FRMD8Q9BZ67 464 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 UCK1Q9HA47 277 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 EMC7Q9NPA0 242 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 WASH6PQ9NQA3 447 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CNOT8Q9UFF9 292 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 RARRES3Q9UL19 164 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 SLC17A4Q9Y2C5 497 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PLEKHM1Q9Y4G2 1056 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ITPR2Q14571 2701 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 SPTBN1Q01082 2364 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KIF26BQ2KJY2 2108 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ABCA2Q9BZC7 2435 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ZC3H12DA2A288 527 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 DBX1A6NMT0 343 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 DVL2O14641 736 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CETN3O15182 167 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 SLC16A3O15427 465 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 BUB1O43683 1085 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 KDELR3O43731 214 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 KLRC4O43908 158 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CUTAO60888 179 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 UBXN7O94888 489 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 PYGLP06737 847 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 AMD1P17707 334 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CASP1P29466 404 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ACVRL1P37023 503 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TSFMP43897 325 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 SULT1E1P49888 294 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 SMSP52788 366 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CASP6P55212 293 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 RPS18P62269 152 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 IRF9Q00978 393 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 OTUD4Q01804 1114 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 OCRLQ01968 901 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 GCNT1Q02742 428 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TLE4Q04727 773 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 RALGDSQ12967 914 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TUBB3Q13509 450 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 LAMB3Q13751 1172 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 MYBPC3Q14896 1274 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 NR1I3Q14994 352 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ACOX1Q15067 660 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 RABEP1Q15276 862 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TAF5Q15542 800 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 AFMIDQ63HM1 303 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 RAET1GQ6H3X3 334 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 IYDQ6PHW0 289 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 FAM180AQ6UWF9 173 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 LIPIQ6XZB0 460 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 DPPA4Q7L190 304 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 SLC26A9Q7LBE3 791 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ATG4DQ86TL0 474 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CUZD1Q86UP6 607 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF354CQ86Y25 554 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 GALNT13Q8IUC8 556 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CEP97Q8IW35 865 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 BCORP1Q8N888 145 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 C1orf131Q8NDD1 294 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF397Q8NF99 534 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 OR8K5Q8NH50 307 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 GRHL3Q8TE85 626 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 PPP4R1Q8TF05 950 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 DLG3Q92796 817 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 MR1Q95460 341 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 VOPP1Q96AW1 172 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ZDHHC12Q96GR4 267 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 PEX11GQ96HA9 241 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 KIRREL1Q96J84 757 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TMX3Q96JJ7 454 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 LRFN5Q96NI6 719 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TGM7Q96PF1 710 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TRAPPC9Q96Q05 1148 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 NPY6RQ99463 290 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 NLNQ9BYT8 704 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CD244Q9BZW8 370 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ATP13A3Q9H7F0 1226 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 METTL14Q9HCE5 456 aaKnown RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 PIGVQ9NUD9 493 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 SPTLC3Q9NUV7 552 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 OLAHQ9NV23 265 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM248Q9NWD8 314 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 OXSMQ9NWU1 459 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 H2AFY2Q9P0M6 372 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-220ENST00000544550 MYOTQ9UBF9 498 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ASH2LQ9UBL3 628 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF212Q9UDV6 495 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms