RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 INPP5DQ92835 1189 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 VPS39Q96JC1 886 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 BIRC8Q96P09 236 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 GPR21Q99679 349 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CPNE1Q99829 537 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CCDC3Q9BQI4 270 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 AARSD1Q9BTE6 412 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 TRIT1Q9H3H1 467 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 WASH6PQ9NQA3 447 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 LATS2Q9NRM7 1088 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 POT1Q9NUX5 634 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 KCNK4Q9NYG8 393 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 TAS2R13Q9NYV9 303 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 MOCS1Q9NZB8 636 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 SCHIP1Q9P0W5 487 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 CPNE7Q9UBL6 633 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 SLC39A10Q9ULF5 831 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CORO1CQ9ULV4 474 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 ASF1AQ9Y294 204 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 WDR37Q9Y2I8 494 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 TDRKHQ9Y2W6 561 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 RNF215Q9Y6U7 377 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 PIKFYVEQ9Y2I7 2098 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 EXOC1LA0A1B0GW35 172 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SLC5A10A0PJK1 596 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 FAM159BA6NKW6 160 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 CXorf49A8MYA2 514 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 PPM1DO15297 605 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RIPK2O43353 540 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 NUDT21O43809 227 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 FAM155BO75949 473 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RPLP0P05388 317 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 GP1BAP07359 652 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 TUBBP07437 444 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 INHBAP08476 426 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 MYBL2P10244 700 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 MTHFD1P11586 935 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 CDK4P11802 303 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 BRAFP15056 766 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 XRCC1P18887 633 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 NDUFS1P28331 727 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 TNFRSF8P28908 595 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PDHA2P29803 388 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SLC19A1P41440 591 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SKIV2L2P42285 1042 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 MSH2P43246 934 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 ACADVLP49748 655 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 OR1D5P58170 312 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 E2F1Q01094 437 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PRKG2Q13237 762 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 ILKQ13418 452 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SPIDRQ14159 915 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 USP10Q14694 798 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 PERM1Q5SV97 790 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RBM20Q5T481 1227 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 ARMC6Q6NXE6 501 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 ZNF549Q6P9A3 640 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 DHRS13Q6UX07 377 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RAPH1Q70E73 1250 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 CYS1Q717R9 158 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 GALNT7Q86SF2 657 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 GLRX5Q86SX6 157 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PDZD3Q86UT5 571 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RELL1Q8IUW5 271 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 CPNE9Q8IYJ1 553 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SFRP1Q8N474 314 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RAB42Q8N4Z0 105 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PHC3Q8NDX5 983 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 SPDYE1Q8NFV5 336 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 OR10G6Q8NH81 332 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 MAGEC3Q8TD91 643 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 JPH3Q8WXH2 748 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 TFGQ92734 400 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 KCNJ9Q92806 393 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 TSPAN17Q96FV3 270 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RMDN2Q96LZ7 410 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 GFM1Q96RP9 751 aaKnown RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 INSM2Q96T92 566 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 RBBP8Q99708 897 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 HGH1Q9BTY7 390 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PARD6BQ9BYG5 372 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 OR52A5Q9H2C5 316 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RHOJQ9H4E5 214 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PLAC1Q9HBJ0 212 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 RRAGDQ9NQL2 400 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 SMYD2Q9NRG4 433 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 DLL3Q9NYJ7 618 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 ZNF624Q9P2J8 865 aaPredicted RBP6.17□□□□□ -1.42
LTBR-212ENST00000543542 RABGEF1Q9UJ41 708 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 VWA7Q9Y334 891 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 DHRS7Q9Y394 339 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 PSAT1Q9Y617 370 aa6.17□□□□□ -1.42
LTBR-212ENST00000543542 OTOGLQ3ZCN5 2332 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms