RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SYT2Q8N9I0 419 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 POMGNT2Q8NAT1 580 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 CADM4Q8NFZ8 388 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 LRRC8CQ8TDW0 803 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 DEPDC1BQ8WUY9 529 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF606Q8WXB4 792 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 ZKSCAN4Q969J2 545 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 RHBDF1Q96CC6 855 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 RMDN1Q96DB5 314 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 TMCO6Q96DC7 493 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 C1orf74Q96LT6 269 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 C16orf45Q96MC5 204 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 PCYT2Q99447 389 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 SLX1AQ9BQ83 275 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 TNMDQ9H2S6 317 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 MMADHCQ9H3L0 296 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 FANCFQ9NPI8 374 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 SLC35C2Q9NQQ7 365 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 GIMAP4Q9NUV9 329 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 AKAP7Q9P0M2 348 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 UBA2Q9UBT2 640 aaPredicted RBP3.43□□□□□ -1.86
LEMD3-204ENST00000542032 FBXL17Q9UF56 701 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 ERVK-11Q9UQG0 969 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 CEPT1Q9Y6K0 416 aa3.43□□□□□ -1.86
LEMD3-204ENST00000542032 A4D1N5 150 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FAM72CH0Y354 149 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 PAPSS1O43252 624 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SPRY1O43609 319 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SEC22BO75396 215 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 AMBPP02760 352 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 MYBL1P10243 752 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 CDH2P19022 906 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SAT1P21673 171 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 IL15P40933 162 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SLC15A1P46059 708 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SORDQ00796 357 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ACTN3Q08043 901 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 KLHL30Q0D2K2 578 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 TMED1Q13445 227 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FGFBP1Q14512 234 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ASTE1Q2TB18 679 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 C9orf152Q5JTZ5 239 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FAM72AQ5TYM5 149 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FAM72DQ6L9T8 149 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 IRGCQ6NXR0 463 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 PPP1R42Q7Z4L9 355 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ZER1Q7Z7L7 766 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 AACSQ86V21 672 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FAM72BQ86X60 149 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 METTL23Q86XA0 190 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 EGFL6Q8IUX8 553 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ARHGAP12Q8IWW6 846 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 BEST3Q8N1M1 668 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 METTL27Q8N6F8 245 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ANKRD20A12PQ8NF67 263 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SLC24A4Q8NFF2 622 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ATP6V0A1Q93050 837 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SAT2Q96F10 170 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 AK8Q96MA6 479 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 DACH2Q96NX9 599 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 DUX3Q96PT4 197 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 MAP7D2Q96T17 732 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ATP6V0BQ99437 205 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 PAFAH2Q99487 392 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 CMKLR1Q99788 373 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 NAA11Q9BSU3 229 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 SYT17Q9BSW7 474 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 LRRC1Q9BTT6 524 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 STRA6Q9BX79 667 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 TEX12Q9BXU0 123 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 TEX13BQ9BXU2 312 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 IFIH1Q9BYX4 1025 aaKnown RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 THAP9Q9H5L6 903 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 FKRPQ9H9S5 495 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 LIN28AQ9H9Z2 209 aaKnown RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 MARCH4Q9P2E8 410 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 CPSF2Q9P2I0 782 aaKnown RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF624Q9P2J8 865 aaPredicted RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 CNOT8Q9UFF9 292 aaKnown RBP3.42□□□□□ -1.86
LEMD3-204ENST00000542032 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 PADI3Q9ULW8 664 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 OR2W1Q9Y3N9 320 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 LOXL2Q9Y4K0 774 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 POMT1Q9Y6A1 747 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 AP1M2Q9Y6Q5 423 aa3.42□□□□□ -1.86
LEMD3-204ENST00000542032 PRPSAP2O60256 369 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 KINO60870 393 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 WDR1O75083 606 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 TADA2AO75478 443 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 APBB3O95704 486 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 CCDC159P0C7I6 412 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PAX1P15863 534 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PTAFRP25105 342 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 HOXC8P31273 242 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 FMO5P49326 533 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 TKTL1P51854 596 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 MFAP4P55083 255 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms