RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SNIP1Q8TAD8 396 aaKnown RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 PATE1Q8WXA2 126 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■■■ 43.6
UBC-208ENST00000540700 FAM136AQ96C01 138 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 ATXN7L3BQ96GX2 97 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 ZNF514Q96K75 400 aaPredicted RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 AARSD1Q9BTE6 412 aaKnown RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 ACSS3Q9H6R3 686 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 SCHIP1Q9P0W5 487 aaPredicted RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 TAAR2Q9P1P5 351 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 LY6G6EA0A0G2JKS1 128 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 MGAT4DA6NG13 374 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 LMO7DNF2Z398 122 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 YKT6O15498 198 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CTIFO43310 598 aaKnown RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 ABHD2P08910 425 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 PKMP14618 531 aaKnown RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 BRAFP15056 766 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 GCAP28676 217 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CD151P48509 253 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CLCNKAP51800 687 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 TLE3Q04726 772 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 DMPKQ09013 629 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 ELOCQ15369 112 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 TAF8Q7Z7C8 310 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 AMZ2Q86W34 360 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 SLC26A11Q86WA9 606 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 ZC3HC1Q86WB0 502 aaKnown RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 FSTL5Q8N475 847 aaPredicted RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 PPM1NQ8N819 430 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CAVIN3Q969G5 261 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 NAF1Q96HR8 494 aaKnown RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 TTC1Q99614 292 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CCM2Q9BSQ5 444 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 COG4Q9H9E3 785 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 PRDM8Q9NQV8 689 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 GNPTGQ9UJJ9 305 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 CDYLQ9Y232 598 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 WDR37Q9Y2I8 494 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 DNMT3AQ9Y6K1 912 aaPredicted RBP16.36■□□□□ 0.21
UBC-208ENST00000540700 CSNK1G3Q9Y6M4 447 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 U3KQA8 63 aa16.36■□□□□ 0.21
UBC-208ENST00000540700 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
UBC-208ENST00000540700 ESR1P03372 595 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 SHBGP04278 402 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 OR56A5P0C7T3 313 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 CDK4P11802 303 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 PDHA2P29803 388 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 PPARGP37231 505 aaPredicted RBP16.35■□□□□ 0.21
UBC-208ENST00000540700 PREPP48147 710 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 CDKN2DP55273 166 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 ILF3Q12906 894 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBC-208ENST00000540700 LRP8Q14114 963 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 SLC29A2Q14542 456 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
UBC-208ENST00000540700 PTRHD1Q6GMV3 140 aaKnown RBP16.35■□□□□ 0.21
UBC-208ENST00000540700 PIM3Q86V86 326 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 LRRC6Q86X45 466 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 VRK3Q8IV63 474 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 CTAGE3PQ8IX95 158 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 MRRFQ96E11 262 aaKnown RBP16.35■□□□□ 0.21
UBC-208ENST00000540700 OLFM1Q99784 485 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 GSDMCQ9BYG8 508 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 PCDHB1Q9Y5F3 818 aa16.35■□□□□ 0.21
UBC-208ENST00000540700 PIEZO2Q9H5I5 2752 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 PRAMEF33A0A0G2JMD5 474 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 SLC5A10A0PJK1 596 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 HMX2A2RU54 273 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 NOBOXO60393 691 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 SNX2O60749 519 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 RPL10P27635 214 aaKnown RBP16.34■□□□□ 0.21
UBC-208ENST00000540700 AOAHP28039 575 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 PHBP35232 272 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 HSD17B3P37058 310 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 CLCN7P51798 805 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 CSE1LP55060 971 aaKnown RBP16.34■□□□□ 0.21
UBC-208ENST00000540700 CLCA4Q14CN2 919 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 BRD3Q15059 726 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 METRNLQ641Q3 311 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 GKN2Q86XP6 184 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 NAGSQ8N159 534 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 FAM46DQ8NEK8 389 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 SPDYE1Q8NFV5 336 aaPredicted RBP16.34■□□□□ 0.21
UBC-208ENST00000540700 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 OR4C6Q8NH72 309 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 HM13Q8TCT9 377 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 ELMO1Q92556 727 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 RBBP8Q99708 897 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 CPNE1Q99829 537 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 OSGEPL1Q9H4B0 414 aa16.34■□□□□ 0.21
UBC-208ENST00000540700 MTO1Q9Y2Z2 717 aaKnown RBP16.34■□□□□ 0.21
UBC-208ENST00000540700 A0A087WUV0 522 aaPredicted RBP16.33■□□□□ 0.2
UBC-208ENST00000540700 C17orf113A0A1B0GUU1 675 aa16.33■□□□□ 0.2
UBC-208ENST00000540700 B4DGG1 531 aa16.33■□□□□ 0.2
UBC-208ENST00000540700 SIGLEC6O43699 453 aa16.33■□□□□ 0.2
UBC-208ENST00000540700 GPC4O75487 556 aa16.33■□□□□ 0.2
UBC-208ENST00000540700 FTH1P02794 183 aa16.33■□□□□ 0.2
UBC-208ENST00000540700 ANXA6P08133 673 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms