RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CRYL1Q9Y2S2 319 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 MED16Q9Y2X0 877 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PCDHB1Q9Y5F3 818 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 A0A1W2PQM1 296 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 TCRBV9S1A1TA0A576 114 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 LILRA5A6NI73 299 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 RHPN2P1A8MT19 583 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 F8W8V4 182 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 H3BMM5 538 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 OPA1O60313 960 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 NIPSNAP2O75323 286 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GPC4O75487 556 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 HAUS5O94927 633 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 TRIM16O95361 564 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ADRB1P08588 477 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GSTA2P09210 222 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CDK4P11802 303 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PKMP14618 531 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ITGB6P18564 788 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 AOAHP28039 575 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GABRB3P28472 473 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PDHA2P29803 388 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 FMO4P31512 558 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC19A1P41440 591 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 MAGEA4P43358 317 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ABCG1P45844 678 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GPR3P46089 330 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PDX1P52945 283 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 MGAT5Q09328 741 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GBX1Q14549 363 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 RPE65Q16518 533 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CCDC157Q569K6 752 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 UBAP2Q5T6F2 1119 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PTRHD1Q6GMV3 140 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CAPRIN2Q6IMN6 1127 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 DUS1LQ6P1R4 473 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF549Q6P9A3 640 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF449Q6P9G9 518 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CNSTQ6PJW8 725 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 DHRS13Q6UX07 377 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 NAPRTQ6XQN6 538 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC9B2Q86UD5 537 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PDZD3Q86UT5 571 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC26A11Q86WA9 606 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 IFT20Q8IY31 132 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CFAP206Q8IYR0 622 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC22A15Q8IZD6 547 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 AVL9Q8NBF6 648 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 GABPB2Q8TAK5 448 aaPredicted RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ASZ1Q8WWH4 475 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 KCNJ9Q92806 393 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 TMEM159Q96B96 161 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 C12orf66Q96MD2 445 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PANX3Q96QZ0 392 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 MCMBPQ9BTE3 642 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CDC42EP4Q9H3Q1 356 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 STN1Q9H668 368 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 UCK1Q9HA47 277 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 LRRC4CQ9HCJ2 640 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC40A1Q9NP59 571 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PPANQ9NQ55 473 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 SMYD2Q9NRG4 433 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 IMP3Q9NV31 184 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 NINJ2Q9NZG7 142 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 ZFATQ9P243 1243 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 MTRF1LQ9UGC7 380 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 NFU1Q9UMS0 254 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 PSAT1Q9Y617 370 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CFAP20Q9Y6A4 193 aaKnown RBP6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 COMMD10Q9Y6G5 202 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 CHD8Q9HCK8 2581 aa6.82□□□□□ -1.32
LPCAT3-209ENST00000540060 IGHV1OR21-1A0A087WYE8 117 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 PRAMEF33A0A0G2JMD5 474 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM159BA6NKW6 160 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CXorf49A8MYA2 514 aaPredicted RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 D6RAR5 112 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 E5RI56 91 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 NTN3O00634 580 aaPredicted RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 KPNA5O15131 536 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 ZZEF1O43149 2961 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SPAG6O75602 509 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SNRNP200O75643 2136 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TCEA3O75764 348 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 PIAS1O75925 651 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SLCO2B1O94956 709 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SLU7O95391 586 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 VIPP01282 170 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 AHSGP02765 367 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 RPLP0P05388 317 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 APOA4P06727 396 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 MYBL2P10244 700 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 ACADLP28330 430 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TNFRSF8P28908 595 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms