RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 DRD1P21728 446 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 HNRNPA2B1P22626 353 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 NR2F2P24468 414 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ACP1P24666 158 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PPIFP30405 207 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 FMO4P31512 558 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 HTR7P34969 479 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ARHGAP25P42331 645 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ABCG1P45844 678 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 MTNR1AP48039 350 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 KCNJ1P48048 391 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RPL15P61313 204 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPIBQ01892 262 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CXCL9Q07325 125 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 GRSF1Q12849 480 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 OVGP1Q12889 678 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SEMA3BQ13214 749 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PLD1Q13393 1074 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 DOC2AQ14183 400 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 LPIN1Q14693 890 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 KARSQ15046 597 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ACOX1Q15067 660 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ST3GAL2Q16842 350 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CCDC57Q2TAC2 916 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 LRIT3Q3SXY7 679 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZIK1Q3SY52 487 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 KCTD21Q4G0X4 260 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 GLE1Q53GS7 698 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 TMEM31Q5JXX7 168 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPDYCQ5MJ68 293 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 C1orf185Q5T7R7 199 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ATG9BQ674R7 924 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RGS7BPQ6MZT1 257 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 TSSK4Q6SA08 328 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CLEC2AQ6UVW9 174 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CLEC17AQ6ZS10 378 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 TOM1L2Q6ZVM7 507 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 MTSS1LQ765P7 747 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 GSTA5Q7RTV2 222 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF551Q7Z340 670 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 AACSQ86V21 672 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF410Q86VK4 478 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPATA24Q86W54 205 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 XYLT1Q86Y38 959 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF280BQ86YH2 543 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 MFN1Q8IWA4 741 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PM20D2Q8IYS1 436 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 BATF2Q8N1L9 274 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SIRT6Q8N6T7 355 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RNF169Q8NCN4 708 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 EXOC6Q8TAG9 804 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 C9orf43Q8TAL5 461 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CHURC1Q8WUH1 139 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 OSCP1Q8WVF1 389 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 OVCA2Q8WZ82 227 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SGCDQ92629 289 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 HAS1Q92839 578 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 C19orf60Q96EN9 201 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ELMOD3Q96FG2 381 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF512Q96ME7 567 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPATA13Q96N96 652 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ZNF558Q96NG5 402 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 NAP1L3Q99457 506 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 EDEM2Q9BV94 578 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 DPCDQ9BVM2 203 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 NPLQ9BXD5 320 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 B3GNT4Q9C0J1 378 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RAB33BQ9H082 229 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 CARD9Q9H257 536 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PDZD7Q9H5P4 517 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RMND5AQ9H871 391 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ECT2Q9H8V3 914 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ANKZF1Q9H8Y5 726 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 GBA2Q9HCG7 927 aaPredicted RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SETD4Q9NVD3 440 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPG21Q9NZD8 308 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 HDAC6Q9UBN7 1215 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 DDX25Q9UHL0 483 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 HAO1Q9UJM8 370 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 GMEB2Q9UKD1 530 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RAB21Q9UL25 225 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PLAGL1Q9UM63 463 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SNX6Q9UNH7 406 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 WBP11Q9Y2W2 641 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 PCDHB2Q9Y5E7 798 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 LAMA5O15230 3695 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 TJP1Q07157 1748 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 ANKRD26Q9UPS8 1709 aa3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 SPTAN1Q13813 2472 aaKnown RBP3.78□□□□□ -1.8
AC055720.1-201ENST00000539552 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
AC055720.1-201ENST00000539552 LOC100653049A0A140TA62 436 aa3.77□□□□□ -1.81
AC055720.1-201ENST00000539552 A0A1W2PR77 199 aa3.77□□□□□ -1.81
AC055720.1-201ENST00000539552 LNP1A1A4G5 178 aa3.77□□□□□ -1.81
AC055720.1-201ENST00000539552 TRIM49BA6NDI0 452 aa3.77□□□□□ -1.81
AC055720.1-201ENST00000539552 CFAP73A6NFT4 308 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms