RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CIDEBQ9UHD4 219 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZDHHC2Q9UIJ5 367 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 GNPTGQ9UJJ9 305 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 TSR3Q9UJK0 312 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 DHRS7Q9Y394 339 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 GRID2O43424 1007 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 SLC25A14O95258 325 aaPredicted RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 TRIM16O95361 564 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 EPHX1P07099 455 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 IGFBP4P22692 258 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 MMP12P39900 470 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 CLCN2P51788 898 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 HK2P52789 917 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 B4GALNT1Q00973 533 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 GK3PQ14409 553 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZDHHC20Q5W0Z9 365 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 TMIEQ8NEW7 156 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 LZICQ8WZA0 190 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 RBM38Q9H0Z9 239 aaKnown RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZDHHC3Q9NYG2 299 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 PLXNB3Q9ULL4 1909 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 NPEPPSL1A6NEC2 478 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 TTC36A6NLP5 189 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 BTN3A1O00481 513 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 ENO3P13929 434 aaPredicted RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATP6V1B1P15313 513 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 EIF2DP41214 584 aaKnown RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 WASP42768 502 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATP6V0D1P61421 351 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 TMEM198Q66K66 360 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 UGT3A1Q6NUS8 523 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 PIWIL4Q7Z3Z4 852 aaKnown RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 MMAAQ8IVH4 418 aaKnown RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 RNF148Q8N7C7 305 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 STAG3L4Q8TBR4 150 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 CATSPER2Q96P56 530 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 PKP2Q99959 881 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 WDR41Q9HAD4 459 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 MBD1Q9UIS9 605 aaPredicted RBP16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRSS51A0A1B0GVH4 220 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 SPINT1O43278 529 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 NPHS1O60500 1241 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 ME2P23368 584 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 NFKBIAP25963 317 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 DPP6P42658 865 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 GALK1P51570 392 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 HERC3Q15034 1050 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 PFKFB4Q16877 469 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 C6orf52Q5T4I8 152 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 ERAP2Q6P179 960 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 LIPIQ6XZB0 460 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 SLC22A9Q8IVM8 553 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 DLG3Q92796 817 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 COPS8Q99627 209 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 WRAP53Q9BUR4 548 aaKnown RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 RIOK2Q9BVS4 552 aaKnown RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRSS16Q9NQE7 514 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 RNF112Q9ULX5 631 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 CDYLQ9Y232 598 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 A0A0J9YVX5 310 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 KERAO60938 352 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 BCAS2O75934 225 aaPredicted RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 APODP05090 189 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 IMPDH1P20839 514 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 ITGB7P26010 798 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 ADSLP30566 484 aaPredicted RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 NSG1P42857 185 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 HSPA13P48723 471 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 MACC1Q6ZN28 852 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 PTGR2Q8N8N7 351 aaPredicted RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 DDX18Q9NVP1 670 aaKnown RBP16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 PIKFYVEQ9Y2I7 2098 aa16.79■□□□□ 0.28
PCDHB17P-201ENST00000539533 LRRC14BA6NHZ5 514 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 H3BQ06 376 aaPredicted RBP16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 STX16-NPEPL1H3BU86 382 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATP6V1G1O75348 118 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 MTX2O75431 263 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 SIX3O95343 332 aaPredicted RBP16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 CAPNS1P04632 268 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 FAM58BPP0C7Q3 252 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 CDKL1Q00532 357 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ART3Q13508 389 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZNF678Q5SXM1 525 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 GPRC6AQ5T6X5 926 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 NXNQ6DKJ4 435 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 TECPR1Q7Z6L1 1165 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 GALNT4Q8N4A0 578 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZFP28Q8NHY6 868 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRPF18Q99633 342 aaKnown RBP16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZBTB26Q9HCK0 441 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms