RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 TRMOQ9BU70 441 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 SMURF2Q9HAU4 748 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 HPF1Q9NWY4 346 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 UBQLN2Q9UHD9 624 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 ING4Q9UNL4 249 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 BAIAP2Q9UQB8 552 aa12.25□□□□□ -0.45
USP3-203ENST00000538686 RUVBL2Q9Y230 463 aaKnown RBP12.25□□□□□ -0.45
USP3-203ENST00000538686 TRAV6A0A075B6T7 132 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 SLC35F4A4IF30 521 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 MROH6A6NGR9 719 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HACD1B0YJ81 288 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 ABCD4O14678 606 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 SLC16A4O15374 487 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HRO43593 1189 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HS6ST1O60243 411 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 VPS26AO75436 327 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 CYP7B1O75881 506 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 MT-ND1P03886 318 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 RPS3P23396 243 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP3-203ENST00000538686 FSHRP23945 695 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HNF1BP35680 557 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 BRCC3P46736 316 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 ZNF143P52747 638 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 HUNKP57058 714 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 SESN2P58004 480 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 C1QTNF8P60827 252 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 YWHAEP62258 255 aaKnown RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 Q3ZCU0 254 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 PLET1Q6UQ28 207 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 LIPIQ6XZB0 460 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HIPK1Q86Z02 1210 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 RNF135Q8IUD6 432 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 ADHFE1Q8IWW8 467 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 TIGD4Q8IY51 512 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 KIAA0319LQ8IZA0 1049 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 FOXJ1Q92949 421 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 CPB2Q96IY4 423 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 SLC19A3Q9BZV2 496 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 RANBP3Q9H6Z4 567 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 TRIM45Q9H8W5 580 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
USP3-203ENST00000538686 LIPT1Q9Y234 373 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 HES2Q9Y543 173 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 ITGB4P16144 1822 aa12.24□□□□□ -0.45
USP3-203ENST00000538686 CIB4A0PJX0 185 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GNB5O14775 395 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MYL12BO14950 172 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ANXA6P08133 673 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 HOXD8P13378 290 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 NCK1P16333 377 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MYL12AP19105 171 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TNFSF8P32971 234 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 NUP62P37198 522 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 LIPAP38571 399 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GLUD2P49448 558 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MAP2K6P52564 334 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 SNAP25P60880 206 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 NFYCQ13952 458 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 LTB4RQ15722 352 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TIGD6Q17RP2 521 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 METTL11BQ5VVY1 283 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GPAT2Q6NUI2 795 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 RANBP10Q6VN20 620 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 IFNEQ86WN2 208 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 JOSD2Q8TAC2 188 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CDCA5Q96FF9 252 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 VPS39Q96JC1 886 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 SIGLEC11Q96RL6 698 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ACOX2Q99424 681 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TMLHEQ9NVH6 421 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 XPR1Q9UBH6 696 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MINPP1Q9UNW1 487 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 KLK4Q9Y5K2 254 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 A0A1W2PQ09 198 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 RPS10-NUDT3A0A1W2PQS6 291 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 EFCAB10A6NFE3 127 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GNGT2O14610 69 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TSC22D2O75157 780 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TNNI1P19237 187 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CAPN3P20807 821 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 HRH2P25021 359 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 FMO3P31513 532 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 ELP6Q0PNE2 266 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 SP140Q13342 867 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ORC1Q13415 861 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 RAPSNQ13702 412 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 DUSP6Q16828 381 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TATDN3Q17R31 274 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms