RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SCML2Q9UQR0 700 aa11.97□□□□□ -0.49
CPSF7-218ENST00000537641 FAM50BQ9Y247 325 aa11.97□□□□□ -0.49
CPSF7-218ENST00000537641 FAM32AQ9Y421 112 aaKnown RBP11.97□□□□□ -0.49
CPSF7-218ENST00000537641 TRIM17Q9Y577 477 aa11.97□□□□□ -0.49
CPSF7-218ENST00000537641 MRPL42Q9Y6G3 142 aaKnown RBP11.97□□□□□ -0.49
CPSF7-218ENST00000537641 COMMD10Q9Y6G5 202 aa11.97□□□□□ -0.49
CPSF7-218ENST00000537641 LOC100130705A0A1B0GUX0 176 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 HTR3EA5X5Y0 456 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 TMEM247A6NEH6 219 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ENPP3O14638 875 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 LSM1O15116 133 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 MRPS14O60783 128 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PRAMEF11O60813 436 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 SERPINF2P08697 491 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 GRK3P35626 688 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PIGAP37287 484 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 NRIP1P48552 1158 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PGFP49763 221 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ERVPABLB-1P60509 514 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 CYP4F3Q08477 520 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 BCL2A1Q16548 175 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 LAIR2Q6ISS4 152 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 RNF165Q6ZSG1 346 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 SLCO6A1Q86UG4 719 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 MON1AQ86VX9 555 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 HIPK1Q86Z02 1210 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 HOMEZQ8IX15 550 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ZCCHC7Q8N3Z6 543 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 CARNMT1Q8N4J0 409 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 CDYL2Q8N8U2 506 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PCSK9Q8NBP7 692 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 OR7A2PQ8NGA2 310 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PHF10Q8WUB8 498 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 FIG4Q92562 907 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 REXO5Q96IC2 774 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 PPP3R2Q96LZ3 170 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 TRIB3Q96RU7 358 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 DGCR6LQ9BY27 220 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 GABARAPL1Q9H0R8 117 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 TRIT1Q9H3H1 467 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ACTL8Q9H568 366 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 CARS2Q9HA77 564 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ANKHQ9HCJ1 492 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ADGRE2Q9UHX3 823 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 EIF2B4Q9UI10 523 aaKnown RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 NOD1Q9Y239 953 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 ORC6Q9Y5N6 252 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 MAGED1Q9Y5V3 778 aaPredicted RBP11.96□□□□□ -0.49
CPSF7-218ENST00000537641 DGKBQ9Y6T7 804 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 HSPE1-MOB4S4R3N1 261 aa11.96□□□□□ -0.49
CPSF7-218ENST00000537641 FAM220BPB1ANY3 271 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 M0QX08 132 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 GNGT2O14610 69 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 TSPAN12O95859 305 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 RETP07949 1114 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 G6PDP11413 515 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PCNAP12004 261 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 TGM1P22735 817 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 HOXD12P35452 270 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 HK3P52790 923 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PRKCZQ05513 592 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 MAD2L1Q13257 205 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PCBP2Q15366 365 aaKnown RBP eCLIP11.95□□□□□ -0.59e-7■■■■□ 22
CPSF7-218ENST00000537641 NR6A1Q15406 480 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 TAF1AQ15573 450 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 NKG7Q16617 165 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 LDLRAP1Q5SW96 308 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 ENPP6Q6UWR7 440 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 RBM23Q86U06 439 aaKnown RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 MFSD4AQ8N468 514 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 GLB1L3Q8NCI6 653 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 FBXO30Q8TB52 745 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 FAR1Q8WVX9 515 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 SLC13A3Q8WWT9 602 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 SGCDQ92629 289 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 FAM162AQ96A26 154 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 TBC1D20Q96BZ9 403 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 YIPF6Q96EC8 236 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 PDFQ9HBH1 243 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 CD274Q9NZQ7 290 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 SCHIP1Q9P0W5 487 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 GALPQ9UBC7 116 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 NUDT5Q9UKK9 219 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 ERVW-1Q9UQF0 538 aa11.95□□□□□ -0.5
CPSF7-218ENST00000537641 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 TNPO3Q9Y5L0 923 aaKnown RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 GPC6Q9Y625 555 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-218ENST00000537641 ELOVL7A1L3X0 281 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 NCF1BA6NI72 391 aaPredicted RBP11.94□□□□□ -0.5
CPSF7-218ENST00000537641 NCF1CA8MVU1 366 aaPredicted RBP11.94□□□□□ -0.5
CPSF7-218ENST00000537641 CXCR6O00574 342 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 BCKDKO14874 412 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 HS6ST1O60243 411 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 KDM1AO60341 852 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 DFNA5O60443 496 aa11.94□□□□□ -0.5
CPSF7-218ENST00000537641 INMTO95050 263 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms