RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 IRF9Q00978 393 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 HYAL2Q12891 473 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PYCR3Q53H96 274 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC35F1Q5T1Q4 408 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PAMR1Q6UXH9 720 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 RANBP10Q6VN20 620 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 C16orf86Q6ZW13 317 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GALNT10Q86SR1 603 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TMC8Q8IU68 726 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 STYXQ8WUJ0 223 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ARL5BQ96KC2 179 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 RANBP3Q9H6Z4 567 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ACSS2Q9NR19 701 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 KCNH7Q9NS40 1196 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SIRT5Q9NXA8 310 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 DNAJB9Q9UBS3 223 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ADAM30Q9UKF2 790 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 AGO1Q9UL18 857 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PCDHA9Q9Y5H5 950 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 MEGF6O75095 1541 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 HNRNPCL2B2RXH8 293 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM86B1E9PN63 330 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ABCD4O14678 606 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 HS6ST1O60243 411 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 NOBOXO60393 691 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PSIP1O75475 530 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 WDR47O94967 919 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 STARD3NLO95772 234 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 DNTTP04053 509 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TPOP07202 933 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 NCK1P16333 377 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 HTR1EP28566 365 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 BCAR1P56945 870 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 KCNK10P57789 538 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 LIPEQ05469 1076 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GRIK2Q13002 908 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 CUL2Q13617 745 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF124Q15973 351 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TATDN3Q17R31 274 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SPANXN3Q5MJ09 141 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 USP50Q70EL3 339 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 B3GNT8Q7Z7M8 397 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 DPP9Q86TI2 863 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ZSWIM9Q86XI8 627 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 FUNDC1Q8IVP5 155 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 CDKL3Q8IVW4 592 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 DAW1Q8N136 415 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 STX19Q8N4C7 294 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 FRS2Q8WU20 508 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 RNF34Q969K3 372 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 REPS1Q96D71 796 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ATXN7L3BQ96GX2 97 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PDLIM5Q96HC4 596 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 LRCH3Q96II8 777 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC9A7Q96T83 725 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ACOX2Q99424 681 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 MAGEL2Q9UJ55 1249 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PCOLCE2Q9UKZ9 415 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 FIS1Q9Y3D6 152 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 PCDHB5Q9Y5E4 795 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 MAGED1Q9Y5V3 778 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 V9GYQ6 96 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 LOC100506127A0A0U1RQW1 187 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 A0A1W2PQ09 198 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 TUBAL3A6NHL2 446 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 LINC00587B1AMM8 73 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 HRO43593 1189 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 PRPSAP2O60256 369 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM20BO75063 409 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 METTL18O95568 372 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 F9P00740 461 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 ERVK-10P10266 1014 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 PRDX5P30044 214 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 FMO3P31513 532 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 CDH6P55285 790 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 ADAM15Q13444 863 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 CAPRIN1Q14444 709 aaKnown RBP8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 OTOP1Q7RTM1 612 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 BNIPLQ7Z465 357 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 RNF180Q86T96 592 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 KRT73Q86Y46 540 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 STX12Q86Y82 276 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 OR6M1Q8NGM8 313 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 ZNF431Q8TF32 576 aaPredicted RBP8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC47A1Q96FL8 570 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM84BQ96KN1 310 aaPredicted RBP8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 TBCDQ9BTW9 1192 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 SETD4Q9NVD3 440 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 PCDHA1Q9Y5I3 950 aa8.4□□□□□ -1.07
SRGAP1-202ENST00000537556 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms