RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ABCE1P61221 599 aaKnown RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 ADRM1Q16186 407 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 FOXB2Q5VYV0 432 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 KIAA0930Q6ICG6 404 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 AFTPHQ6ULP2 937 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 BEND5Q7L4P6 421 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 CLHC1Q8NHS4 586 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 MGME1Q9BQP7 344 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 CCDC28BQ9BUN5 200 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 TRIM8Q9BZR9 551 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 MIR1-1HGQ9H1L0 117 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 FAM83DQ9H4H8 585 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 GIMAP4Q9NUV9 329 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 EIF2B4Q9UI10 523 aaKnown RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 MYRFQ9Y2G1 1151 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 WDR37Q9Y2I8 494 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 NUMBLQ9Y6R0 609 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 USP34Q70CQ2 3546 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 LILRB3O75022 631 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PENKP01210 267 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 SERPINE1P05121 402 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 CES1P23141 567 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 SERPINB1P30740 379 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 VAC14Q08AM6 782 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PCLAFQ15004 111 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 LDLRAP1Q5SW96 308 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 ERAP2Q6P179 960 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 VITQ6UXI7 678 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 BNC2Q6ZN30 1099 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PRR23CQ6ZRP0 262 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 CHST15Q7LFX5 561 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 TDRPQ86YL5 185 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 GPSM1Q86YR5 675 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 SCML4Q8N228 414 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 HDDC3Q8N4P3 179 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 TXNDC5Q8NBS9 432 aaKnown RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PIWIL2Q8TC59 973 aaKnown RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 OVCA2Q8WZ82 227 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 HPS1Q92902 700 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 COG4Q9H9E3 785 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 FBXL21Q9UKT6 434 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 OR1A2Q9Y585 309 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PRSS21Q9Y6M0 314 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 FAM186AA6NE01 2351 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 C16orf96A6NNT2 1141 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PRPF4O43172 522 aaKnown RBP eCLIP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 MOSPD3O75425 235 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TPPPO94811 219 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 CD160O95971 181 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 JUNP05412 331 aaKnown RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 KRT8P05787 483 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 HIST1H2AGP0C0S8 130 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PABPC4LP0CB38 370 aaKnown RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 HIST1H2ADP20671 130 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 ADRA1AP35348 466 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PPARGP37231 505 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 SLC7A9P82251 487 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TFF2Q03403 129 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 RUNX3Q13761 415 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TAF1AQ15573 450 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 INAQ16352 499 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TMEM53Q6P2H8 277 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 KLHL35Q6PF15 583 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 NCEH1Q6PIU2 408 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 CRTC1Q6UUV9 634 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 SYTL1Q8IYJ3 562 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 CFAP206Q8IYR0 622 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PQLC1Q8N2U9 271 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 OR2A12Q8NGT7 310 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PHOSPHO2Q8TCD6 241 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 COX4I2Q96KJ9 171 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 HIST1H2AHQ96KK5 128 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 UHRF1Q96T88 793 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 HIST1H2AJQ99878 128 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 H2AFJQ9BTM1 129 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 MRPS26Q9BYN8 205 aaKnown RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 SFXN1Q9H9B4 322 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 THAP1Q9NVV9 213 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 PLAGL1Q9UM63 463 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 AP4S1Q9Y587 144 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TRPM6Q9BX84 2022 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 J3QRK9 145 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 MAGEC1O60732 1142 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 ACADMP11310 421 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 CA5AP35218 305 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 STT3AP46977 705 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 ARCN1P48444 511 aaKnown RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 TTPAP49638 278 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 INHBCP55103 352 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 POLR2LP62875 67 aaKnown RBP8.09□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF234Q14588 700 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 CRY1Q16526 586 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
ABCA4-207ENST00000536513 AP5B1Q2VPB7 878 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms