RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ASB1Q9Y576 335 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 F5H5T6 163 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CAPN15O75808 1086 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CYP7B1O75881 506 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 S100A3P33764 101 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CBLBQ13191 982 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 GATAD2AQ86YP4 633 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 GPC2Q8N158 579 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CLIP4Q8N3C7 705 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 LINC01465Q8N7H1 131 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 PROKR1Q8TCW9 393 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 BRSK1Q8TDC3 778 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CHPT1Q8WUD6 406 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ADAM2Q99965 735 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CLPBQ9H078 707 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ATP13A1Q9HD20 1204 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 PDP1Q9P0J1 537 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF701M0R085 212 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SLC1A7O00341 560 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 GABRDO14764 452 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 LDB2O43679 373 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 APOA1P02647 267 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 DNAJB1P25685 340 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 GTF2E2P29084 291 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 RCVRNP35243 200 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ADAM17P78536 824 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 RAPSNQ13702 412 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF598Q86UK7 904 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SCML4Q8N228 414 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 REXO5Q96IC2 774 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 BBS2Q9BXC9 721 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 POU2F3Q9UKI9 436 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 TULP3O75386 442 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 COL6A1P12109 1028 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 CD36P16671 472 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 HLA-DPA1P20036 260 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 FDXRP22570 491 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 NUDT6P53370 316 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ERVPABLB-1P60509 514 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 FAM189BP81408 668 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 AQP6Q13520 282 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 LETMD1Q6P1Q0 360 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 TMC5Q6UXY8 1006 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 PLEKHH3Q7Z736 793 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 TANKQ92844 425 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 CSF3RQ99062 836 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 MAGEE1Q9HCI5 957 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SMPD4Q9NXE4 827 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ABCD2Q9UBJ2 740 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 PSMD8P48556 350 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 NEK2P51955 445 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 RBM48Q5RL73 367 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SMYD5Q6GMV2 418 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 MSANTD2Q6P1R3 559 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ZDHHC21Q8IVQ6 265 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SLC22A15Q8IZD6 547 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 CHDHQ8NE62 594 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 SPPL2AQ8TCT8 520 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 FUBP1Q96AE4 644 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ZFYVE19Q96K21 471 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF599Q96NL3 588 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ATOH8Q96SQ7 321 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 TRMT13Q9NUP7 481 aaKnown RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 OPTCQ9UBM4 332 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF490Q9ULM2 529 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-232ENST00000535094 PCDHB9Q9Y5E1 797 aa15.65■□□□□ 0.1
MCF2L-232ENST00000535094 A6NL46 340 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 ALPLP05186 524 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 GSTM4Q03013 218 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 ABRAXAS2Q15018 415 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 PDPRQ8NCN5 879 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 OR52J3Q8NH60 311 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 FARSBQ9NSD9 589 aaKnown RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 IKZF3Q9UKT9 509 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 H0YAE9 185 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 EEDO75530 441 aaKnown RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 RHOQP17081 205 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 HTR1EP28566 365 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 PSAPL1Q6NUJ1 521 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 YTHDF1Q9BYJ9 559 aaKnown RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 ZNF451Q9Y4E5 1061 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 TFECO14948 347 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 COQ9O75208 318 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 RPS24P62847 133 aaKnown RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 GALNT1Q10472 559 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 MS4A13Q5J8X5 152 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 CADM3Q8N126 398 aa15.64■□□□□ 0.09
MCF2L-232ENST00000535094 UBA2Q9UBT2 640 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-232ENST00000535094 A8MV72 311 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-232ENST00000535094 MATN4O95460 622 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 NDST3O95803 873 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 NR4A2P43354 598 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 RGS4P49798 205 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 ADARB1P78563 741 aaKnown RBP15.63■□□□□ 0.09
MCF2L-232ENST00000535094 EMX2Q04743 252 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 TAF10Q12962 218 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 GTF2H2Q13888 395 aa15.63■□□□□ 0.09
MCF2L-232ENST00000535094 CES5AQ6NT32 575 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms