RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZFP37Q9Y6Q3 630 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 C2orf81A6NN90 581 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 F5H5T6 163 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 UPK1AO00322 258 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 TLR5O60602 858 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 GMNNO75496 209 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PARNO95453 639 aaKnown RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 ENO2P09104 434 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 HOXD9P28356 352 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PIGAP37287 484 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 ITGADQ13349 1161 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 LAPTM4AQ15012 233 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 GTDC1Q4AE62 458 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 FAM171A1Q5VUB5 890 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 CCSAPQ6IQ19 270 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 AFTPHQ6ULP2 937 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PIWIL3Q7Z3Z3 882 aaKnown RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 ZFAND4Q86XD8 727 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 OR4F6Q8NGB9 312 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 CD200R1Q8TD46 325 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 NCLNQ969V3 563 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 MTFMTQ96DP5 389 aaKnown RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PALMDQ9NP74 551 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 HCSTQ9UBK5 93 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PCDHB8Q9UN66 801 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PCDHB5Q9Y5E4 795 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PCDHGA8Q9Y5G5 932 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 NLRC5Q86WI3 1866 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 AQP9O43315 295 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 GUCY1B2O75343 617 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 BCL10O95999 233 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 HTR1EP28566 365 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 DAG1Q14118 895 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 FAM98BQ52LJ0 330 aaKnown RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 USP51Q70EK9 711 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 ZDHHC13Q8IUH4 622 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 PHACTR4Q8IZ21 702 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 BPIFB1Q8TDL5 484 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 CCDC138Q96M89 665 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 TRIB3Q96RU7 358 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 BRINP2Q9C0B6 783 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 TOR1BO14657 336 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 STX7O15400 261 aaKnown RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 ANXA6P08133 673 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 HSPA7P48741 367 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 TWF1Q12792 350 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 COQ5Q5HYK3 327 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 NKAPQ8N5F7 415 aaKnown RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 BORCS5Q969J3 196 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 AURKBQ96GD4 344 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 CSF3RQ99062 836 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 NSUN3Q9H649 340 aaKnown RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 POPDC3Q9HBV1 291 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 SCUBE2Q9NQ36 999 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 UBA2Q9UBT2 640 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-226ENST00000533820 CDH7Q9ULB5 785 aa19.02■□□□□ 0.64
CAPN1-226ENST00000533820 TRIM64A6NGJ6 449 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 CST1P01037 141 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 PRLP01236 227 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 UMPSP11172 480 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 CDH1P12830 882 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 HOXB8P17481 243 aaPredicted RBP19.02■□□□□ 0.63
CAPN1-226ENST00000533820 CTPS1P17812 591 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 TYMPP19971 482 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 MGAT3Q09327 533 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 TRIM32Q13049 653 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF829Q3KNS6 432 aaPredicted RBP19.02■□□□□ 0.63
CAPN1-226ENST00000533820 WDR45BQ5MNZ6 344 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF773Q6PK81 442 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 GLB1LQ6UWU2 654 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 RNF19BQ6ZMZ0 732 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 RFPL4BQ6ZWI9 263 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 SNX29P2Q8IUI4 249 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 REM2Q8IYK8 340 aaPredicted RBP19.02■□□□□ 0.63
CAPN1-226ENST00000533820 SLC22A17Q8WUG5 538 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 BEGAINQ9BUH8 593 aa19.02■□□□□ 0.63
CAPN1-226ENST00000533820 SCHIP1Q9P0W5 487 aaPredicted RBP19.02■□□□□ 0.63
CAPN1-226ENST00000533820 MOXD2PA6NHM9 499 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 A8MX80 341 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 NT5C1B-RDH14C9J2C7 533 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 G3V2T6 193 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 PFDN6O15212 129 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 TEX28O15482 410 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ALPLP05186 524 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ALDH3A2P51648 485 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 LSM3P62310 102 aaKnown RBP19.01■□□□□ 0.63
CAPN1-226ENST00000533820 FAM174BQ3ZCQ3 159 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 NIPAL1Q6NVV3 410 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF598Q86UK7 904 aaKnown RBP19.01■□□□□ 0.63
CAPN1-226ENST00000533820 DENND1CQ8IV53 801 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 KRTCAP2Q8N6L1 136 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 OR6K2Q8NGY2 324 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF420Q8TAQ5 688 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-226ENST00000533820 FNIP2Q9P278 1114 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ADGRE2Q9UHX3 823 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 INVSQ9Y283 1065 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 GREB1Q4ZG55 1949 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 GSNP06396 782 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 IRF1P10914 325 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms